Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq73 98.7 1e-15 seq15 98.7 1e-15 >seq73 Length=471550 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 15973 GGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGATCC 16032 |||||| ||||||||||||||||| ||||||||||||||| || |||||||||||||| Sbjct 198912 GGGCGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCC 198971 Query 16033 CCTCTTCGCCCA 16044 |||| ||||||| Sbjct 198972 CCTCATCGCCCA 198983 >seq15 Length=1383265 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 15973 GGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGATCC 16032 |||||| ||||||||||||||||| ||||||||||||||| || |||||||||||||| Sbjct 373796 GGGCGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCC 373737 Query 16033 CCTCTTCGCCCA 16044 |||| ||||||| Sbjct 373736 CCTCATCGCCCA 373725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567218280076000