Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq252 136 3e-27
>seq252
Length=176535
Score = 136 bits (150), Expect = 3e-27
Identities = 202/280 (72%), Gaps = 6/280 (2%)
Strand=Plus/Plus
Query 37831 ACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGT 37890
||||| | |||||||| |||| || | || || ||||| ||||| |||||||| |
Sbjct 29758 ACGATGACCTGTGGAACTCGGCCCAGCTGCAACTGGTGCGAGAGGGCAAGATGCACGGAT 29817
Query 37891 ATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GC 37948
| |||||||||| ||| |||||| || | || ||| | | | || | || | ||
Sbjct 29818 TTCTGCGCATGTACTGGGCCAAGAAGATACTCGAGTGGACGGCC-ACGC-CGGAACAGGC 29875
Query 37949 GCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGG 38008
|||| | ||| | ||| ||||| || |||||||| | |||||||| |||||||||||
Sbjct 29876 GCTCGAGTACTCGATTCTGCTCAACGACAAGTACAGTCTAGACGGGCGCGATCCCAACGG 29935
Query 38009 TTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGCGCGAGATTC 38067
|| || ||||| ||||||| || || |||| ||||||| | | |||| ||| |
Sbjct 29936 CTATGTGGGCTGCATGTGGTCCAT-TGGGGGCATACACGACATGGGCTGGAAGGAGCGTG 29994
Query 38068 CCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107
| || | || |||||||| ||||||||||| | |||||
Sbjct 29995 CGATATTTGGAAAGATTCGCTACATGAACTATCAAGGATG 30034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397053036151870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |