Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq252 136 3e-27 >seq252 Length=176535 Score = 136 bits (150), Expect = 3e-27 Identities = 202/280 (72%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 37831 ACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGT 37890 ||||| | |||||||| |||| || | || || ||||| ||||| |||||||| | Sbjct 29758 ACGATGACCTGTGGAACTCGGCCCAGCTGCAACTGGTGCGAGAGGGCAAGATGCACGGAT 29817 Query 37891 ATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GC 37948 | |||||||||| ||| |||||| || | || ||| | | | || | || | || Sbjct 29818 TTCTGCGCATGTACTGGGCCAAGAAGATACTCGAGTGGACGGCC-ACGC-CGGAACAGGC 29875 Query 37949 GCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGG 38008 |||| | ||| | ||| ||||| || |||||||| | |||||||| ||||||||||| Sbjct 29876 GCTCGAGTACTCGATTCTGCTCAACGACAAGTACAGTCTAGACGGGCGCGATCCCAACGG 29935 Query 38009 TTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGCGCGAGATTC 38067 || || ||||| ||||||| || || |||| ||||||| | | |||| ||| | Sbjct 29936 CTATGTGGGCTGCATGTGGTCCAT-TGGGGGCATACACGACATGGGCTGGAAGGAGCGTG 29994 Query 38068 CCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 | || | || |||||||| ||||||||||| | ||||| Sbjct 29995 CGATATTTGGAAAGATTCGCTACATGAACTATCAAGGATG 30034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397053036151870