Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq134 102 2e-16
>seq134
Length=322322
Score = 102 bits (112), Expect = 2e-16
Identities = 279/421 (66%), Gaps = 6/421 (1%)
Strand=Plus/Plus
Query 297254 GGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAA-CCATTCAC 297312
|||||||| | | || || || ||||| ||||| ||||| || |||| || |||||
Sbjct 20425 GGATTGTAGTTGGCTATCTTGGTGGACCATCCGGTGCCGATGCC-CTCGGCTCCGTTCAC 20483
Query 297313 CAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATA 297372
||||| |||| || | |||| ||| || ||| |||||| | | || |||||
Sbjct 20484 CAGAACCATCGGTATGATGGGCAGATACCACAATGGCTCGATCCTCTGGCCATCATCGGT 20543
Query 297373 CAGATATTTCAGAAGATTATCGTCCGTATCGACGAAAACCTGTCGAGTCTGAGGGTTCAG 297432
| | || | ||| || ||||||| | | | | | || ||| | || ||
Sbjct 20544 CTGGTACTCCAGCAGCGGATCGTCCAGGGGGTGGTAGATGAGGCGCGTCAGCGGCGACAT 20603
Query 297433 TTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAA 297492
||||||||| || || || || || ||||| || ||| ||| | | ||||||
Sbjct 20604 CAATGTGAAAATGTAACGAGCGCTGGCACAGTCCTTGCCGCCCGTCAACCGAGTACCGAA 20663
Query 297493 CTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTT 297552
||| || |||| || | |||||||||| || ||||| || | ||| || || ||
Sbjct 20664 CTGACCGCGCGGCTCCAGCAAGTTGATGTTGTTCGAGCCGACGTAGTTCTGGGCCAGATT 20723
Query 297553 CACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGC-GCTATGCTCTGCAACGT 297611
|||||| ||| || || || | ||||| ||||| || || | || ||| || |||
Sbjct 20724 CACGATAGTCATCTGGAGGGAAACCTCGCCGTGGTGGTATGCCGACAT-CTCAGCCACGG 20782
Query 297612 AACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAA--AGCTGAATA 297669
|||| | ||| || |||||||| ||| | | ||||||||||| || |||| |
Sbjct 20783 AACCAGACAGCTGGGCCACCTTCACCTCGCGCTTGTCGTTGCGCTTGAAGCAGGTGAACA 20842
Query 297670 T 297670
|
Sbjct 20843 T 20843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102852657192250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |