Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq300 86.0 7e-12
seq73 84.2 2e-11
seq22 84.2 2e-11
seq15 84.2 2e-11
seq8 84.2 2e-11
>seq300
Length=136790
Score = 86.0 bits (94), Expect = 7e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 85758 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 85699
Query 92675 CCCACTCCCGCCACTAG 92691
|| | ||||| || ||
Sbjct 85698 CCTATCCCCGCAACCAG 85682
>seq73
Length=471550
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 243749 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 243808
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 243809 CCTATCCCCGCAAC 243822
>seq22
Length=1073832
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 471950 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 471891
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 471890 CCTATCCCCGCAAC 471877
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 1052818 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 1052877
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 1052878 CCTATCCCCGCAAC 1052891
>seq15
Length=1383265
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 152574 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 152515
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 152514 CCTATCCCCGCAAC 152501
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 328991 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 328932
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 328931 CCTATCCCCGCAAC 328918
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 1022153 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 1022094
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 1022093 CCTATCCCCGCAAC 1022080
>seq8
Length=1553183
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 327590 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 327531
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 327530 CCTATCCCCGCAAC 327517
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 899395 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 899336
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 899335 CCTATCCCCGCAAC 899322
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||| |||||||||| ||||||||||||||| ||| | | |||||||||
Sbjct 1467996 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 1468055
Query 92675 CCCACTCCCGCCAC 92688
|| | ||||| ||
Sbjct 1468056 CCTATCCCCGCAAC 1468069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526585662901200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |