Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq111 372 3e-98 seq6 154 1e-32 seq23 147 2e-30 seq35 141 9e-29 seq51 118 1e-21 >seq111 Length=362587 Score = 372 bits (412), Expect = 3e-98 Identities = 584/826 (71%), Gaps = 10/826 (1%) Strand=Plus/Plus Query 132607 TGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTC 132666 || || ||| | |||||||||||||| || || || ||||| |||| || || | | Sbjct 244372 TGGTACTCGGCAACCTTTTTCTCAAAGAAGTTTGTCTTTCCGTCCAGAGAGATCATATCC 244431 Query 132667 ATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGC 132726 || ||| ||||| || ||||||||| ||| | || || | ||||| Sbjct 244432 ATGAAACTGAAGGGATTCTTAGTGTTGTAGATCTTACCCACACCGAGCTCCATCAGCAGA 244491 Query 132727 CTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGAC-G 132785 | ||||| || || || ||||| || |||||| |||| || | || | || | | Sbjct 244492 CGATCGGCGACAAATTCAATGTACTGGGACATGAGGACGCAGTTCATGCCAATCAAATTG 244551 Query 132786 CACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTC 132845 || ||||| ||||||||||| || ||||||||| |||| || || | | ||| || Sbjct 244552 CAG-GGCAGGGCTTCGGTGAGGAACTCTTGCTCGATTTCGACAGCATCCCTAATGATCTC 244610 Query 132846 CCTAACGCGCGCCGCGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAA-GCAAAG 132903 ||| |||| || |||| || || ||||||| ||||| | |||| | ||| |||||| Sbjct 244611 AATAATGCGCTCC-CGCTTGGGACGCTGCACCAGATGCTGGTACATGA-GCACCGCAAAG 244668 Query 132904 TCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATG 132963 ||||| || | || ||||| | || || || |||||| ||| |||| ||||||||| Sbjct 244669 TCGCAGTGGAGACCTTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATG 244728 Query 132964 AGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCG 133023 ||||| || || || |||||||| || | ||| || ||||| ||||||| || || Sbjct 244729 AGGCCACGCTTCTTCAGCCAAAAGATCGAGGCAAAGCTGCCGCTGAAGAAGATTCCTTCC 244788 Query 133024 ACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGC 133083 ||||| || || || | | |||||| | || |||| ||| || |||||| | Sbjct 244789 ACGGCTGCAAAGGCAATAATACGCTCGGCAAAGTTGGCCGATTTCGAGGATATCCAGGAC 244848 Query 133084 AGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGG 133143 || ||||| || ||||| || || |||||| || || | || || ||||| | Sbjct 244849 AGGGCCCAGTCTGCCTTGCGCTTTACAGCCGGCATGGTCTCAACAGCATTGAACAA--GT 244906 Query 133144 AGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGT 133201 ||| | || | || | | | ||||||||| ||||| ||||| || |||| Sbjct 244907 AGTCGCGCTCCTTCGGCTCCCGTATGTAGGTGTCAATGAGCACGCTGTACATCTCGGAGT 244966 Query 133202 GTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTT 133261 | |||||||||||||| || || |||||||| ||||| |||||||| | |||||| | Sbjct 244967 GCACGTTCTCCATGGCAATCTGGAAGCCGTAGAAGCAACGCGCCTCCGTGATCTGCACCT 245026 Query 133262 CTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGG 133321 | ||| ||| |||||||||||||| ||||| || ||||| ||| ||| ||||| |||| Sbjct 245027 CCTGACTGAAGCGCTCGACCAGATTCTCGTTAACAATGCCATCGGAGGCAGCGAAGAAGG 245086 Query 133322 CCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGT 133381 |||||||||| |||||| | ||||||||||||| ||| || ||||||| || || Sbjct 245087 CCAGCACGTGGGAGATGAAGTAGCGCTCGTTGTCGGTCAGACGGGCCCAGTCTGTCGCGT 245146 Query 133382 CCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 |||| || || |||||||| || || ||||| || || || ||||| Sbjct 245147 CCTTCGATAGATCCACCTCTTCCACAGTCCAGAAGGAGGCTTCGGC 245192 >seq6 Length=3104374 Score = 154 bits (170), Expect = 1e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| || || ||||| ||||| ||||| ||||||||| | || |||||| || Sbjct 2898251 AAAATGCAAATTTTTGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGCCC 2898310 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| ||||| ||||| |||||| | || Sbjct 2898311 TCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGAT 2898370 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| |||||||| || | ||||| || ||||||| Sbjct 2898371 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 2898430 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||| ||||| |||| ||||| |||||||| || Sbjct 2898431 AACATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCG 2898468 >seq23 Length=1278451 Score = 147 bits (162), Expect = 2e-30 Identities = 166/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || || || ||||| | || ||||||||||||||| | || || ||| | Sbjct 1264320 AAAATGCAGATCTTTGTGAAAACCTTGACTGGCAAAACCATCACCTTGGAGGTTGAGCCA 1264261 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || | || |||| ||||| |||||||| ||| | || Sbjct 1264260 TCCGACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGA 1264202 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | ||| ||||| |||||||| || | || || || ||||| Sbjct 1264201 CCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGACTA 1264142 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| ||||| | || || ||||||||||||||| Sbjct 1264141 CAACATCCAGAAGGAGTCCACTCTCCATTTGGTGCTGCGT 1264102 Score = 141 bits (156), Expect = 9e-29 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||||||||||||| | || || ||| | || Sbjct 1263405 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAAACCATCACCCTGGAGGTTGAGCCATCC 1263346 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| |||||||| ||| | ||||| Sbjct 1263345 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 1263287 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| |||||||| || | || || || |||||||| Sbjct 1263286 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGACTACAA 1263227 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||||||||||||||| Sbjct 1263226 CATCCAGAAGGAGTCTACTCTCCATTTGGTGCTGCGT 1263190 Score = 141 bits (156), Expect = 9e-29 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||||||||||||| | || || ||| | || Sbjct 1263633 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAAACCATCACCCTGGAGGTTGAGCCATCC 1263574 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| |||||||| ||| | ||||| Sbjct 1263573 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 1263515 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| |||||||| || | || || || |||||||| Sbjct 1263514 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGACTACAA 1263455 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||||||||||||||| Sbjct 1263454 CATCCAGAAGGAGTCCACTCTCCATTTGGTGCTGCGT 1263418 Score = 141 bits (156), Expect = 9e-29 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||||||||||||| | || || ||| | || Sbjct 1263861 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAAACCATCACCCTGGAGGTTGAGCCATCC 1263802 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| |||||||| ||| | ||||| Sbjct 1263801 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 1263743 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| |||||||| || | || || || |||||||| Sbjct 1263742 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGACTACAA 1263683 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||||||||||||||| Sbjct 1263682 CATCCAGAAGGAGTCCACTCTCCATTTGGTGCTGCGT 1263646 Score = 141 bits (156), Expect = 9e-29 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||||||||||||| | || || ||| | || Sbjct 1264089 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAAACCATCACCCTGGAGGTTGAGCCATCC 1264030 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| |||||||| ||| | ||||| Sbjct 1264029 GACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 1263971 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| |||||||| || | || || || |||||||| Sbjct 1263970 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACTCTTTCTGACTACAA 1263911 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || ||||||||||||||| Sbjct 1263910 CATCCAGAAGGAGTCCACTCTCCATTTGGTGCTGCGT 1263874 >seq35 Length=832945 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| |||| |||||| || | Sbjct 773877 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 773818 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| |||||| | || || Sbjct 773817 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 773758 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| ||||| |||||||| |||| || || | |||||||||| Sbjct 773757 CAGCGTTTGATTTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 773698 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| |||| ||||||||||||| || || | || ||| Sbjct 773697 ATCCAGAAGGAGTCGACTTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 773650 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| |||| |||||| || | Sbjct 774105 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCTCG 774046 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| |||||| | || || Sbjct 774045 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 773986 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| ||||| |||||||| |||| || || | |||||||||| Sbjct 773985 CAGCGTTTGATTTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 773926 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| |||| ||||||||||||| || || | || ||| Sbjct 773925 ATCCAGAAGGAGTCGACTTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 773878 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || || ||||| ||||| ||| |||| |||||| || Sbjct 774336 AACATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATAACCCTCGAGGTCGAGCCC 774277 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| ||||| ||||| |||||| | || Sbjct 774276 TCGGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGAT 774217 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| | |||| ||| ||||| |||||||| |||| || || | ||||||| Sbjct 774216 CAGCAGCGTTTGATTTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTAC 774157 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||| ||||| |||| ||||||||||||| || || | || ||| Sbjct 774156 AACATCCAGAAGGAGTCGACTTTGCATTTGGTGCTCCGCCTGCGCGGTGGC 774106 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| | || |||||| || | Sbjct 773649 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTCGAGCCCTCG 773590 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| |||||| | || || Sbjct 773589 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 773530 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || ||||| |||||||| |||| || || | |||||||||| Sbjct 773529 CAGCGTTTGATCTTTGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACTACAAC 773470 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| |||| |||||||||| ||||| Sbjct 773469 ATCCAGAAGGAGTCGACTTTGCATTTGGTATTGCGT 773434 >seq51 Length=625475 Score = 118 bits (130), Expect = 1e-21 Identities = 226/330 (68%), Gaps = 5/330 (2%) Strand=Plus/Minus Query 107496 CGGCCGCCCGAGTTGCCGGTGGTCTTGCTCAACGGATGGTCGGTGAGGCCCAGATCGTCC 107555 ||| |||| | ||||||||||||||||||| | ||| | ||||| || || Sbjct 71561 CGGGCGCCGGCATTGCCGGTGGTCTTGCTCAGCTCGTGGCCACCCTTGCCCAAGTCATCA 71502 Query 107556 CTGTCCGTGTGCACGACCAGACTCCGTCCGATGATGCTGTGCGGGCCGTACAAAGTCACG 107615 || | ||| ||||||| | ||||| |||||||||| | ||| | | ||| | Sbjct 71501 GCATCGGCGTGGACGACCACGGTGCGTCCAATGATGCTGTCGGCACCGAAAAGAGTGATC 71442 Query 107616 ACGCCGTCCGTCAAGCTCACCTCGGTGAGCGCGTCGCGGCCCGCCGACTTGAGGTTGCCC 107675 ||| || | ||| || | ||| | ||||| | ||||| | | ||||||| Sbjct 71441 TTTGAGTCGGTGATGCTGACAGCCGTGGGGCTGTCGCCGGCCGCC---TGAATGTTGCCC 71385 Query 107676 AGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGC-GCTTCGTCGGGTT 107734 | |||||| | ||| | | ||||| || ||| || ||||| || ||| || || || Sbjct 71384 AAGTCGCCCAAGTGGCGGTTCTCGTCGGTGGGGGCACCGTGCTCCTTGCTGCGG-GGATT 71326 Query 107735 GAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACTCGTGCACGTGGAA 107794 ||| || ||||| |||| ||||||||||| | |||||||||||||||||| ||||| Sbjct 71325 GAAGTGGGGGCCGGACGACATGCAGCCGTTGGTGTTGTCGCCGAACTCGTGCACATGGAA 71266 Query 107795 GCCGTGCAGGCCGCGCGGCAGGCCGAGCAC 107824 || ||||| || | ||||| ||||| Sbjct 71265 TCCATGCAGTCCCTTGGTAAGGCCCAGCAC 71236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160702070400