Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq134 89.7 6e-13
seq8 86.0 7e-12
>seq134
Length=322322
Score = 89.7 bits (98), Expect = 6e-13
Identities = 179/263 (68%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 167539 TCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTTA 167598
|||||||| ||| | | || ||||| || ||||| | ||||| || | ||||||||
Sbjct 20635 TCCTTGCCGCCCGTCAACCGAGTACCGAACTGACCGCGCGGCTCCAGCAAGTTGATGTTG 20694
Query 167599 TTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGTT-TCAGCGAGGGAAACTTCGCC 167657
||||| || || | | ||||| || ||||| || || | ||||||||| |||||
Sbjct 20695 TTCGAGCCGACGTAGTTCTGGGCCAGATTCACGATAGTCATCTG-GAGGGAAACCTCGCC 20753
Query 167658 GTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCATC 167717
||||||||| || | | |||||||| | | | || ||| || ||||||| |||
Sbjct 20754 GTGGTGGTATGCCGACATCTCAGCCACGGAACCAGACAGCTGGGCCACCTTCACCTCGCG 20813
Query 167718 TTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCATC 167777
||| || | ||| || | |||| |||||||| || || ||||| |||||
Sbjct 20814 CTTGTCGTTGCGCTTGAAGCAGGTGAACATGACCTTGCGCTGTCCCGGCTTGAGGCCATC 20873
Query 167778 TGCCACGTGAGCAATTGAGCGCT 167800
||| | | || |||||||
Sbjct 20874 CACCAGGCTGGGGATGGAGCGCT 20896
>seq8
Length=1553183
Score = 86.0 bits (94), Expect = 7e-12
Identities = 148/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 40209 CCATCGTCCAATCCGCCCGTGTTTCCTATGGCGACGGTACC--AAAACCACCCGTGGAGA 40266
|||| || || | || |||||||||||||| ||||||| ||| | | | |||
Sbjct 1364656 CCATTGTGCAGGCGGCGCGTGTTTCCTATGGGCGCGGTACCCGCAAAGTATCAGAGGATG 1364715
Query 40267 CCGTGGGCTCATCCGATATCTCCTTAGGCACTGGCATACGACCCCTTTTGAAATGGTCGA 40326
| ||||| ||||| ||||| | ||||| | ||| | | || ||||||||| |||
Sbjct 1364716 C--GGGGCTTATCCGCTATCTGATGCGGCACCGTCATTCCTCGCCGTTTGAAATGTGCGA 1364773
Query 40327 TTTCAAGTTTCACATCAAAATGCCCATCTACATCGCACGACAGCACCTTCGGCACCGCAC 40386
|||| |||||| ||||| | || || | ||| || || ||| |||| || ||||
Sbjct 1364774 GATCAAATTTCACGTCAAACTACCGATTTTCATTGCTCGGCAGTGGATTCGTCATCGCAT 1364833
Query 40387 CGCCAGTGTGAATGAGTTGTCTGCTCGTTACTC 40419
||||| ||||| || | ||||| || || ||
Sbjct 1364834 GGCCAGCGTGAACGAATATTCTGCCCGCTATTC 1364866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588961754143000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |