Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq328 98.7 1e-15
>seq328
Length=165906
Score = 98.7 bits (108), Expect = 1e-15
Identities = 221/328 (67%), Gaps = 7/328 (2%)
Strand=Plus/Minus
Query 106280 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 106339
|| |||| |||||||||||| | |||||| || | || | | ||| || || ||
Sbjct 106676 TCAGCGAAACCTTGAACACCTATACCAATTGGACGATGCCTTAAATTGGATTTCTTAGCT 106617
Query 106340 GTCT--CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 106397
||| ||| ||| ||| | || |||| || | | || |||||||| | |||| | |
Sbjct 106616 -TCTGGCAAGGGG-TAATAGTTGATGTCTATTATTTTATTAAGATTTTTAGCAACAGTTT 106559
Query 106398 TTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTG 106457
| || | || | | ||||| ||||||| || | ||| | ||| || |
Sbjct 106558 TGGTTACATCTTTTAATTTTTTGAAATCAAATGTTT---TTTCTGGTGTTACAAACATGT 106502
Query 106458 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 106517
||| || ||||| || |||||||||||||| ||||||| | | |||||| | ||
Sbjct 106501 TAAGTGCAATTGAAGCTAAATTGCAAACAGCGATCTCATCAGGTGCAGAGTACTCAACAA 106442
Query 106518 TTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGT 106577
|||||||||| || || | ||||| || || | ||| | ||| || |||||| | |
Sbjct 106441 TTTCTGTACATAAATTACTGCATTTAATAGTGCCAACATTTTGTTGATTGCTCTTTCTAT 106382
Query 106578 TGCACGCATCCTTGTAGAGCATGTAGGG 106605
| || | |||||| | |||||||| ||
Sbjct 106381 TACAGGAATCCTTAAAAAGCATGTATGG 106354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589966529839400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |