Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq39 93.3 6e-14 seq26 93.3 6e-14 >seq39 Length=736423 Score = 93.3 bits (102), Expect = 6e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 112199 TTGTGCGCTGTTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCGCTGGTT 112258 ||| |||| ||||||||||||||||||||||| ||||||| ||||| |||||||| Sbjct 89811 TTGCGCGCCCTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGCTGGTT 89870 Query 112259 CGAATCCAGCACGGCGCACCA 112279 ||||||||||| ||||| ||| Sbjct 89871 CGAATCCAGCAGGGCGCGCCA 89891 >seq26 Length=998041 Score = 93.3 bits (102), Expect = 6e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 112199 TTGTGCGCTGTTAGCTCAGTTGGATAGAGCAACGTTCTTCTAAAGCGTGGGTCGCTGGTT 112258 ||| |||| ||||||||||||||||||||||| ||||||| ||||| |||||||| Sbjct 454344 TTGCGCGCCCTTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGCTGGTT 454403 Query 112259 CGAATCCAGCACGGCGCACCA 112279 ||||||||||| ||||| ||| Sbjct 454404 CGAATCCAGCAGGGCGCGCCA 454424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752586596371400