Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq73 82.4 9e-11 seq15 82.4 9e-11 >seq73 Length=471550 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 163577 CGAATAGCTCAGCGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCCT 163636 ||| ||||||||||||||||| ||| ||||||| ||||| | ||||||||||||||||| Sbjct 198915 CGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCCCCT 198974 Query 163637 CTTCG 163641 | ||| Sbjct 198975 CATCG 198979 >seq15 Length=1383265 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 163577 CGAATAGCTCAGCGGTAGAGCACCTCCTTTACACGGAGATTGTCGGGGGTTCGATCCCCT 163636 ||| ||||||||||||||||| ||| ||||||| ||||| | ||||||||||||||||| Sbjct 373793 CGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCCCCT 373734 Query 163637 CTTCG 163641 | ||| Sbjct 373733 CATCG 373729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611681204603000