Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq39 89.7 9e-13 seq26 89.7 9e-13 >seq39 Length=736423 Score = 89.7 bits (98), Expect = 9e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 16119 AATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTAT 16178 ||||||||||||| | ||||||||||| | | || | ||||||||||||| |||||||| Sbjct 89893 AATGGCGCGCCCTGCTGGATTCGAACCAGCGGCCCACAGCTTAGAAGGCTGTTGCTCTAT 89834 Query 16179 CC-ACTGAGCTAAGAGCGC 16196 || ||||||||||| |||| Sbjct 89833 CCAACTGAGCTAAGGGCGC 89815 >seq26 Length=998041 Score = 89.7 bits (98), Expect = 9e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 16119 AATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTAT 16178 ||||||||||||| | ||||||||||| | | || | ||||||||||||| |||||||| Sbjct 454426 AATGGCGCGCCCTGCTGGATTCGAACCAGCGGCCCACAGCTTAGAAGGCTGTTGCTCTAT 454367 Query 16179 CC-ACTGAGCTAAGAGCGC 16196 || ||||||||||| |||| Sbjct 454366 CCAACTGAGCTAAGGGCGC 454348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911072362904200