Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_016761.1
Length=38684
Score E
Sequences producing significant alignments: (Bits) Value
seq39 93.3 1e-14
seq26 93.3 1e-14
>seq39
Length=736423
Score = 93.3 bits (102), Expect = 1e-14
Identities = 63/71 (89%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 2813 TGGTGCGGCATGCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCC 2872
||| ||| | ||| ||||||||||| |||||| || ||||||||||| ||||||||||||
Sbjct 89891 TGGCGCGCCCTGCTGGATTCGAACCAGCGGCCCACAGCTTAGAAGGCTGTTGCTCTATCC 89832
Query 2873 AACTGAGCTAA 2883
|||||||||||
Sbjct 89831 AACTGAGCTAA 89821
>seq26
Length=998041
Score = 93.3 bits (102), Expect = 1e-14
Identities = 63/71 (89%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 2813 TGGTGCGGCATGCAGGATTCGAACCTGCGGCCAACCGCTTAGAAGGCGGTTGCTCTATCC 2872
||| ||| | ||| ||||||||||| |||||| || ||||||||||| ||||||||||||
Sbjct 454424 TGGCGCGCCCTGCTGGATTCGAACCAGCGGCCCACAGCTTAGAAGGCTGTTGCTCTATCC 454365
Query 2873 AACTGAGCTAA 2883
|||||||||||
Sbjct 454364 AACTGAGCTAA 454354
Score = 80.6 bits (88), Expect = 7e-11
Identities = 122/171 (71%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 28045 CATGATCTTCGCCGCACAGCCAGCACGCTGTTGCATGAGGCTGGTTATCCATCTGACTGG 28104
|||||| | ||| | || || ||||| ||| |||| ||||| |||||| |||| |||
Sbjct 160651 CATGATTTGCGCAGGACGGCAAGCACTCTGCTGCACGAGGCAGGTTATAATACTGATTGG 160710
Query 28105 ATAGAAAAGGCGCTGGCGCATGAGCAAAAGGGAGTGCGTGCGGTATACAACAAAGCGGAG 28164
|| || ||| || || |||||||| || || || | || || || || || || ||
Sbjct 160711 ATCGAGAAGTGCCTTGCCCATGAGCAGAAAGGTGTAAGAGCTGTTTATAATAAGGCCGAA 160770
Query 28165 TATGCGCGGC-AGCGCGCCTACATGTTGCAGCAGTGGGCTGATATGGTTGA 28214
||| || | | ||||| || ||| | || | |||||||||||| ||||
Sbjct 160771 TAT-CGTGACCAGCGCACCGCTATGCTTCAAGACTGGGCTGATATGATTGA 160820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123664358359620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |