Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq26 95.1 2e-14
seq22 95.1 2e-14
>seq26
Length=998041
Score = 95.1 bits (104), Expect = 2e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 23073 GCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGT 23132
||||| |||||| ||||| || || ||||| ||||| ||||| ||||| || || || ||
Sbjct 19319 GCCTTCCCATTCGGGTTCAAGAGGGGTGACATTTACAATGATACCGCAGCGTGCGTAGGT 19378
Query 23133 CGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTT 23192
||||||||| || || | || | || || |||||||| ||| | ||| ||||
Sbjct 19379 CGATTTGCCAAGACACACGACAAGAACATCGCGCGGAATACGGAAATATTCGATGGTGTG 19438
Query 23193 TGCCAGTGCGAAACTGTTCGGCGGAATGAT 23222
||||| | || ||||| |||||||| ||
Sbjct 19439 AGCCAGCACAAAGCTGTTGGGCGGAATAAT 19468
>seq22
Length=1073832
Score = 95.1 bits (104), Expect = 2e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 23073 GCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGT 23132
||||| |||||| ||||| || || ||||| ||||| ||||| ||||| || || || ||
Sbjct 350822 GCCTTCCCATTCGGGTTCAAGTGGGGTGACATTTACAATGATACCGCAGCGTGCGTAGGT 350763
Query 23133 CGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTT 23192
||||||||| || || | || | || || |||||||| ||| | ||| ||||
Sbjct 350762 CGATTTGCCTAGACACACGACAAGAACATCGCGCGGAATACGGAAATATTCGATGGTGTG 350703
Query 23193 TGCCAGTGCGAAACTGTTCGGCGGAATGAT 23222
||||| | || ||||| |||||||| ||
Sbjct 350702 AGCCAGCACAAAGCTGTTGGGCGGAATAAT 350673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 897571889454800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |