Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq26 95.1 2e-14 seq22 95.1 2e-14 >seq26 Length=998041 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 23073 GCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGT 23132 ||||| |||||| ||||| || || ||||| ||||| ||||| ||||| || || || || Sbjct 19319 GCCTTCCCATTCGGGTTCAAGAGGGGTGACATTTACAATGATACCGCAGCGTGCGTAGGT 19378 Query 23133 CGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTT 23192 ||||||||| || || | || | || || |||||||| ||| | ||| |||| Sbjct 19379 CGATTTGCCAAGACACACGACAAGAACATCGCGCGGAATACGGAAATATTCGATGGTGTG 19438 Query 23193 TGCCAGTGCGAAACTGTTCGGCGGAATGAT 23222 ||||| | || ||||| |||||||| || Sbjct 19439 AGCCAGCACAAAGCTGTTGGGCGGAATAAT 19468 >seq22 Length=1073832 Score = 95.1 bits (104), Expect = 2e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 23073 GCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGT 23132 ||||| |||||| ||||| || || ||||| ||||| ||||| ||||| || || || || Sbjct 350822 GCCTTCCCATTCGGGTTCAAGTGGGGTGACATTTACAATGATACCGCAGCGTGCGTAGGT 350763 Query 23133 CGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTT 23192 ||||||||| || || | || | || || |||||||| ||| | ||| |||| Sbjct 350762 CGATTTGCCTAGACACACGACAAGAACATCGCGCGGAATACGGAAATATTCGATGGTGTG 350703 Query 23193 TGCCAGTGCGAAACTGTTCGGCGGAATGAT 23222 ||||| | || ||||| |||||||| || Sbjct 350702 AGCCAGCACAAAGCTGTTGGGCGGAATAAT 350673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897571889454800