Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq22 86.0 1e-11
seq15 86.0 1e-11
seq8 86.0 1e-11
seq300 84.2 4e-11
seq73 84.2 4e-11
>seq22
Length=1073832
Score = 86.0 bits (94), Expect = 1e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 471950 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 471891
Query 133023 CCCTCCCCCGCATCCAC 133039
|| ||||||| ||||
Sbjct 471890 CCTATCCCCGCAACCAC 471874
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 1052818 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 1052877
Query 133023 CCCTCCCCCGCATCCA 133038
|| ||||||| |||
Sbjct 1052878 CCTATCCCCGCAACCA 1052893
>seq15
Length=1383265
Score = 86.0 bits (94), Expect = 1e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 328991 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 328932
Query 133023 CCCTCCCCCGCATCCAC 133039
|| ||||||| ||||
Sbjct 328931 CCTATCCCCGCAACCAC 328915
Score = 86.0 bits (94), Expect = 1e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 1022153 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 1022094
Query 133023 CCCTCCCCCGCATCCAC 133039
|| ||||||| ||||
Sbjct 1022093 CCTATCCCCGCAACCAC 1022077
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 152574 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 152515
Query 133023 CCCTCCCCCGCATCCACAA 133041
|| ||||||| ||| ||
Sbjct 152514 CCTATCCCCGCAACCAAAA 152496
>seq8
Length=1553183
Score = 86.0 bits (94), Expect = 1e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 899395 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 899336
Query 133023 CCCTCCCCCGCATCCAC 133039
|| ||||||| ||||
Sbjct 899335 CCTATCCCCGCAACCAC 899319
Score = 86.0 bits (94), Expect = 1e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 1467996 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 1468055
Query 133023 CCCTCCCCCGCATCCAC 133039
|| ||||||| ||||
Sbjct 1468056 CCTATCCCCGCAACCAC 1468072
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 327590 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 327531
Query 133023 CCCTCCCCCGCATCCA 133038
|| ||||||| |||
Sbjct 327530 CCTATCCCCGCAACCA 327515
>seq300
Length=136790
Score = 84.2 bits (92), Expect = 4e-11
Identities = 66/79 (84%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 85758 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 85699
Query 133023 CCCTCCCCCGCATCCACAA 133041
|| ||||||| ||| ||
Sbjct 85698 CCTATCCCCGCAACCAGAA 85680
>seq73
Length=471550
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022
|||||||||||||| |||||||||||| ||||||||||| |||||| |||||||||
Sbjct 243749 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 243808
Query 133023 CCCTCCCCCGCATCCA 133038
|| ||||||| |||
Sbjct 243809 CCTATCCCCGCAACCA 243824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895744733650200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |