Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq26 96.9 5e-15 >seq26 Length=998041 Score = 96.9 bits (106), Expect = 5e-15 Identities = 211/316 (67%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 84828 GCGACGCCGCGTCGGCCTTGCGGCGCATGTGGCGGAAGATGGTCTTATTGAGCGTCTCGG 84887 |||||||||| || |||| ||| || || |||| || | ||||| || | Sbjct 832468 GCGACGCCGCATCAGCCTGTGTGCGGATATGCTGGAAAATCTTTTTATTCCAGACCTTTG 832409 Query 84888 CCGCCATGCTCTCGAACGGGATGTCGAGCGACTGGAGCAGCGAGTGGAAGCCCAGCAGGC 84947 || || || || ||||| | || | ||| || | || ||||| |||| | | Sbjct 832408 CCATCACACTTTCAAACGGCAAGTTCTTGGCCTGAAGGAAGGAATGGAACCCCATGACAC 832349 Query 84948 CCAGGCCCACCGAGCGCTCGCGCACGGCGCTGTAGGAGGCCCGGTGCATCTCGTCCGGCG 85007 ||| || ||||| |||||||||| |||| || | |||| | ||| || | || | Sbjct 832348 CCATACCAACCGAACGCTCGCGCATGGCGGCATAAGCGGCCTTTTCCATTTCCTTGGGGG 832289 Query 85008 CGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCATCAGGTCTTCGATGAAGG 85067 | ||| ||||| |||| | | ||| || || | | |||||| |||||| ||||| Sbjct 832288 CACGGTCAATGAAGTCCTGCAAGACGTTATCAAGGAAGAGCATCACGTCTTCAATGAACT 832229 Query 85068 TCGGGTGATCCTTCCATTCGACCCACTTTTCGGCGTTGACGCTCGACAGGCAGCAGACGG 85127 ||| | ||| ||||| | ||||| |||| |||| | |||||||||||| |||| Sbjct 832228 GCGGATTATCTTTCCACTGATCCCACGTTTCCAGATTGAGGGACGACAGGCAGCAAACGG 832169 Query 85128 CCGTGCGCATCTTGCC 85143 | |||||| ||||| Sbjct 832168 CGGTGCGCTGTTTGCC 832153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715758687168000