Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq111 159 6e-34
>seq111
Length=362587
Score = 159 bits (176), Expect = 6e-34
Identities = 353/522 (68%), Gaps = 12/522 (2%)
Strand=Plus/Minus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571
|||||| | |||||| | ||||| | |||||| | | |||| | ||| || |
Sbjct 245178 CTGGACTGTGGAAGAGGTGGATCTATCGAAGGACGCGACAGACTGGGCCCGTCTGACCGA 245119
Query 25572 AGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGT 25631
|||||| | || || ||||| |||| ||||| || ||||| ||||| || ||
Sbjct 245118 CAACGAGCGCTACTTCATCTCCCACGTGCTGGCCTTCTTCGCTGCCTCCGATGGCATTGT 245059
Query 25632 GAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTT 25691
|||||||||||| |||| | |||| ||| |||||| | |||||| || ||
Sbjct 245058 TAACGAGAATCTGGTCGAGCGCTTCAGTCAGGAGGTGCAGATCACGGAGGCGCGTTGCTT 244999
Query 25692 CTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT 25751
|||||| |||||||| ||||| || || |||||||| ||| |||| | ||| | |
Sbjct 244998 CTACGGCTTCCAGATTGCCATGGAGAACGTGCACTCCGAGATGTACAGCGTGCTCAT--T 244941
Query 25752 GACGTACATTACAGAC-GTCGCCGAGAGAGATCGGC----TGTTTGGTGCCATCGAGCAC 25806
||| || |||| || | ||||| ||| || | |||| ||| | ||| |
Sbjct 244940 GAC--AC-CTACATACGGGAGCCGAAGGAGCGCGACTACTTGTTCAATGCTGTTGAGACC 244884
Query 25807 ATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC-GC 25865
|| || | ||| | ||||| |||||| || ||||| | | | | | | ||
Sbjct 244883 ATGCCGGCTGTAAAGCGCAAGGCAGACTGGGCCCTGTCCTGGAT-ATCCTCGAAATCGGC 244825
Query 25866 TACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTC 25925
| |||| |||||| | | |||||||| || ||||| || ||||| ||||||||
Sbjct 244824 CAACTTTGCCGAGCGTATTATTGCCTTTGCAGCCGTGGAAGGAATCTTCTTCAGCGGCAG 244765
Query 25926 GTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAA 25985
||||| | ||||| ||||| ||| || || ||||||||| ||| ||| |||||
Sbjct 244764 CTTTGCCTCGATCTTTTGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCAA 244705
Query 25986 CGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGC 26027
|||||| ||| | ||||| ||||||||| | || |||||
Sbjct 244704 CGAGCTGATCTCTCGTGACGAAGGTCTCCACTGCGACTTTGC 244663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928822333566400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |