Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq39 84.2 2e-11 seq26 84.2 2e-11 seq73 82.4 8e-11 seq15 82.4 8e-11 >seq39 Length=736423 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 17055 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAGTCCAGC 17113 |||||||||||||||||||||| ||||||||||| || || ||||||||||| |||||| Sbjct 89822 TAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGCTGGTTCGAATCCAGC 89880 >seq26 Length=998041 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 17055 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAGTCCAGC 17113 |||||||||||||||||||||| ||||||||||| || || ||||||||||| |||||| Sbjct 454355 TAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGCTGGTTCGAATCCAGC 454413 >seq73 Length=471550 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 28884 GATTAGCTCAGCGGTAGAGCATCTCGTTTACACCGAGGCGGTCGGCGGTTCAATCCCGTC 28943 |||||||||||||||||||| |||||||||||||||| || ||| ||||| ||||| || Sbjct 198916 GATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCCCCTC 198975 Query 28944 ATC 28946 ||| Sbjct 198976 ATC 198978 >seq15 Length=1383265 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 28884 GATTAGCTCAGCGGTAGAGCATCTCGTTTACACCGAGGCGGTCGGCGGTTCAATCCCGTC 28943 |||||||||||||||||||| |||||||||||||||| || ||| ||||| ||||| || Sbjct 373792 GATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCCCCTC 373733 Query 28944 ATC 28946 ||| Sbjct 373732 ATC 373730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516467507640000