Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq39 84.2 2e-11
seq26 84.2 2e-11
seq73 82.4 8e-11
seq15 82.4 8e-11
>seq39
Length=736423
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 17055 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAGTCCAGC 17113
|||||||||||||||||||||| ||||||||||| || || ||||||||||| ||||||
Sbjct 89822 TAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGCTGGTTCGAATCCAGC 89880
>seq26
Length=998041
Score = 84.2 bits (92), Expect = 2e-11
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 17055 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAGTCCAGC 17113
|||||||||||||||||||||| ||||||||||| || || ||||||||||| ||||||
Sbjct 454355 TAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGCTGGTTCGAATCCAGC 454413
>seq73
Length=471550
Score = 82.4 bits (90), Expect = 8e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 28884 GATTAGCTCAGCGGTAGAGCATCTCGTTTACACCGAGGCGGTCGGCGGTTCAATCCCGTC 28943
|||||||||||||||||||| |||||||||||||||| || ||| ||||| ||||| ||
Sbjct 198916 GATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCCCCTC 198975
Query 28944 ATC 28946
|||
Sbjct 198976 ATC 198978
>seq15
Length=1383265
Score = 82.4 bits (90), Expect = 8e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 28884 GATTAGCTCAGCGGTAGAGCATCTCGTTTACACCGAGGCGGTCGGCGGTTCAATCCCGTC 28943
|||||||||||||||||||| |||||||||||||||| || ||| ||||| ||||| ||
Sbjct 373792 GATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCCCCTC 373733
Query 28944 ATC 28946
|||
Sbjct 373732 ATC 373730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516467507640000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |