Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_019933.2
Length=43870
Score E
Sequences producing significant alignments: (Bits) Value
seq22 87.8 5e-13
>seq22
Length=1073832
Score = 87.8 bits (96), Expect = 5e-13
Identities = 249/375 (66%), Gaps = 6/375 (2%)
Strand=Plus/Plus
Query 6546 GACCGCCTGCGTCTGGCTCTGTTGCAGGC-ACAGCTGGCCGAGTTCCCGGCTACCGGTAT 6604
||||| |||||||| || || ||||| | ||| |||| || | || || || |||
Sbjct 653778 GACCGACTGCGTCTCGCCATGATGCAGACCACAT-TGGCGGAATATCCAGCGACAGGTCA 653836
Query 6605 TGTCCTTAACCCGGCAGATTGGGCCGGCATTGAACTCCTGAAGGACACTCAGGGCCGCTA 6664
| || || ||| | || |||||| | || ||||| || || | ||| |||||
Sbjct 653837 CATTCTAAAACCGACCGACTGGGCCAGTATCGAACTGACTAAAGATAGACAGCTTCGCTA 653896
Query 6665 CATCCTGGGTAATCCGCA-GGGCACCCTGGCCCCAACTCTGTGGGGTCTGCCGGTTGTTG 6723
||| | | |||||||| |||| |||| || || || ||||| |||| || | |
Sbjct 653897 CATTTTTGCTAATCCGCTTGGGCTGACTGGACCAAAA-CTCTGGGGGATGCCTGTCGCAG 653955
Query 6724 CAACTCAGGCGATGGCTGTGGGCCAGTTCCTGACCGGTGCCTTTGATGCCGGT-GCACAG 6782
|| | || |||||| |||| | || |||| || || ||| | | || || |||
Sbjct 653956 AAAGCCTTGCCATGGCTCAGGGCAAATTAATGACGGGCGC-TTTCAGTCTGGCCGCGCAG 654014
Query 6783 GTCTTTGATCGCTGGGCCGCCCGCGTTGAGGTTGCCACCGAGAATCAGGATGACTTCATC 6842
| ||||| || || || || || | || || | | ||| ||||| ||
Sbjct 654015 ATTTTTGACCGTGAGGATGCGACTGTCAGCATTTCGACAGAAGACCGGGAAAACTTCGTC 654074
Query 6843 AAGAACATGGTCACCATCCTGGCCGAAGAGCGCTTGGCTCTGGCGGTCTATCGTCCGGAG 6902
||||| ||||||||||| ||||| || || || |||||||||| ||||| || || ||
Sbjct 654075 AAGAAAATGGTCACCATTCTGGCAGAGGAACGTCTGGCTCTGGCCGTCTACCGCCCTGAA 654134
Query 6903 TCCTTCATCAAGGGT 6917
| | ||||| |||
Sbjct 654135 GCGCTGATCAATGGT 654149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 140259177033040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |