Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq234 87.8 2e-12
>seq234
Length=227530
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || |||||||| || | ||||| || ||||| || || ||||| ||
Sbjct 10135 ATGCAGATCTTTGTAAAGACCCTTACGGGCAAGACCATAACTCTTGAGGTCGAACCGTCG 10076
Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || |||| || || | || |||||||| ||| | || ||||||
Sbjct 10075 GATACCATCGAAAATGTCAAAGCCAAGATTCAG-GACAAAGAAGGAATTCCTCCAGATCA 10017
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTAT 28730
||| | | ||||| || |||||||||||||||||| | || ||||| | ||||||
Sbjct 10016 ACAACGCTTGATCTTCGCTGGCAAACAATTGGAAGATGGCCGAACACTAT--CTGATTAT 9959
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763
|||||||| || || || || |||| |||||
Sbjct 9958 AACATTCAGAAGGAGTCCACCTTGCATTTGGTA 9926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425394767758365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |