Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq73 89.7 7e-13 seq15 89.7 7e-13 >seq73 Length=471550 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 108518 TGGGCGATGAGGGAATCGAACCCCCGACCCTCTCCGTGTAAAGGAGGTGCGCTACCGCTG 108577 ||||||||||||| |||||||||||| || |||| ||||||| ||| || ||||||||| Sbjct 198983 TGGGCGATGAGGGGATCGAACCCCCGGCCATCTCGGTGTAAACGAGACGCTCTACCGCTG 198924 Query 108578 CGCTAATCGCCC 108589 ||||||||||| Sbjct 198923 AGCTAATCGCCC 198912 >seq15 Length=1383265 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 108518 TGGGCGATGAGGGAATCGAACCCCCGACCCTCTCCGTGTAAAGGAGGTGCGCTACCGCTG 108577 ||||||||||||| |||||||||||| || |||| ||||||| ||| || ||||||||| Sbjct 373725 TGGGCGATGAGGGGATCGAACCCCCGGCCATCTCGGTGTAAACGAGACGCTCTACCGCTG 373784 Query 108578 CGCTAATCGCCC 108589 ||||||||||| Sbjct 373785 AGCTAATCGCCC 373796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633498276889800