Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq328 188 4e-43
>seq328
Length=165906
Score = 188 bits (208), Expect = 4e-43
Identities = 332/479 (69%), Gaps = 6/479 (1%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
||| || | ||| |||||||| | |||||||| | ||| | |||| ||||||||||
Sbjct 106164 CATGAAAAGATCGGGAATCCATAAAGCATAAAAAAGATCCCGTGCTCGGTTTTCTTCTTT 106105
Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051
||| ||| ||||||| || ||||| || ||||||| |||||| ||||| || |||||||
Sbjct 106104 TCCAGTGTTTCTTTTG-AGGTCTAAAAATTCAAAAACATCTGAATGCCAGGGCTCTAAAT 106046
Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111
| |||||||| ||| ||||||||| || || ||||| || |||| ||| | ||
Sbjct 106045 AAATAGCAAAGGCACCAGGTCTTTTTCCACCTCCCTGATCAACATATCGTGCCACATTAT 105986
Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171
| || ||| | | |||||||||||||||| ||||| ||||| || | | || |
Sbjct 105985 TAAATACTCTTAGCATTGGAACTAATCCATTTGAAGTACCGTTCGTTCCACATATGGAAG 105926
Query 26172 ATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAG 26231
||| | | | |||| ||| ||| || || |||||||| || |||| |||||
Sbjct 105925 TGCCTTTGGCACGAATACAATGAACATTAAGTCCAATTCCACCCGCTGATTTGGAAATCA 105866
Query 26232 CTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATA 26291
|||||| | | ||||| | ||||| |||| || ||| |||||| || |
Sbjct 105865 TTGCACATTGTTCAACTGATTTAAAAATACCTTCAATTGAATCCGAATTCATTGTCAAAA 105806
Query 26292 AAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCAT 26351
|||||| || |||| ||| | || |||| | | | ||| | || || | ||||
Sbjct 105805 GAAAACATGAGGATAGTTGAGGGCGATTTGTAGCAGCAGCAAAAAGAGTTGGCGAGGCAT 105746
Query 26352 GAGTATAATATCCTTCACTCAAAGCTG--TATAAGTTTCAAGAACTTCATCGATATTGT 26408
| ||| |||||| | || |||| | | |||||||||| | || || | |||| ||
Sbjct 105745 GCGTAAAATATC--GCTCTGAAAGTAGGTTGTAAGTTTCAACAGCTGCACCAATATCGT 105689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253034032605125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |