Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq22 82.4 9e-11 >seq22 Length=1073832 Score = 82.4 bits (90), Expect = 9e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| ||||| || || || ||||||||||| | || || ||||| || || || || Sbjct 489143 CATGGCCTCGGCCGCCGCCGTTGCTTCATCCAGCAGGGACGCGTTGGCAATATCCAACCC 489202 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || ||||| || || | || ||| |||| | | ||||| | | |||||| || Sbjct 489203 GGTCAGTTCGGTAATCATGGTCTGGAAATTCAGCAGGGCTTCAAGCCGCCCCTGACTGAT 489262 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 |||| || || || || || | ||||||||| ||||| || |||| |||||||| Sbjct 489263 TTCAGGCTGGTACGGCGTATAGGCTGTGTACCAGGCTGGATTTTCCAGAATATTTCGCTG 489322 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAAG 140083 ||||| ||| || || || || || || || ||||| || Sbjct 489323 AATGACACCGGGCAGGATTGTGCCGTAATAGCCCTGCCCTATCAG 489367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578984395476200