Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq73 91.5 2e-13 seq15 91.5 2e-13 >seq73 Length=471550 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 13797 CGAATAGCTCAGCGGTAGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGATCCCCT 13856 ||| ||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| Sbjct 198915 CGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCCCCT 198974 Query 13857 CTTCG 13861 | ||| Sbjct 198975 CATCG 198979 >seq15 Length=1383265 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 13797 CGAATAGCTCAGCGGTAGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGATCCCCT 13856 ||| ||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| Sbjct 373793 CGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATCCCCT 373734 Query 13857 CTTCG 13861 | ||| Sbjct 373733 CATCG 373729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561234424814000