Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq234 143 5e-29
>seq234
Length=227530
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | ||| || | ||| ||||| || || | ||| || || ||||||||||||
Sbjct 9909 CCACCACGAAGCCGCAGTACCAAATGCAAGGTGGACTCCTTCTGAATGTTATAATCAGAT 9968
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
| |||||| |||| ||||||||||| ||||| ||||| || | |||||||| || ||
Sbjct 9969 AGTGTTCGGCCATCTTCCAATTGTTTGCCAGCGAAGATCAAGCGTTGTTGATCTGGAGGA 10028
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
||||||||||| || || || || ||| ||||| || | ||| |||| ||| ||
Sbjct 10029 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACC 10088
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| ||||| ||||| || || || | || || | ||| ||||||||
Sbjct 10089 TCAAGAGTTATGGTCTTGCCCGTAAGGGTCTTTACAAAGATCTGCAT 10135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984455592587250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |