Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq26 156 7e-33 seq22 156 7e-33 >seq26 Length=998041 Score = 156 bits (172), Expect = 7e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35547 CCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACA 35606 ||||||||||| || | ||| || || || || |||||||||| || | |||||| Sbjct 19257 CCTTCGTTCGCATAGATACGGGCAGGAAGCGGCGTTGTGTTGCTGATTTCAATAGTCACC 19316 Query 35607 TGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAG 35666 || |||||||| || ||||| || || || || || || |||||||| ||||| |||||| Sbjct 19317 TGGCCTTCCCATTCGGGTTCAAGAGGGGTGACATTTACAATGATACCGCAGCGTGCGTAG 19376 Query 35667 GTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTG 35726 || || || | |||||| || || || | ||||||||| ||||| ||||||| ||| Sbjct 19377 GTCGATTTGCCAAGACACACGACAAGAACATCGCGCGGAATACGGAAATATTCGATGGTG 19436 Query 35727 CGTGCCAGAGCGAAGCTGTTCGGCGGAATCA-GGATGCTGTCAGCCTT 35773 | ||||| | |||||||| |||||||| | | || | ||||||||| Sbjct 19437 TGAGCCAGCACAAAGCTGTTGGGCGGAATAATGCATTC-GTCAGCCTT 19483 >seq22 Length=1073832 Score = 156 bits (172), Expect = 7e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35547 CCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACA 35606 ||||||||||| || | ||| || ||||| || |||||||||| || | ||||| Sbjct 350884 CCTTCGTTCGCATAGATACGGGCAGGCAGCGGCGTTGTGTTGCTGATTTCAATGGTCACC 350825 Query 35607 TGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAG 35666 || |||||||| || ||||| || || || || || || |||||||| ||||| |||||| Sbjct 350824 TGGCCTTCCCATTCGGGTTCAAGTGGGGTGACATTTACAATGATACCGCAGCGTGCGTAG 350765 Query 35667 GTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTG 35726 || || || | |||||| || || || | ||||||||| ||||| ||||||| ||| Sbjct 350764 GTCGATTTGCCTAGACACACGACAAGAACATCGCGCGGAATACGGAAATATTCGATGGTG 350705 Query 35727 CGTGCCAGAGCGAAGCTGTTCGGCGGAATCA-GGATGCTGTCAGCCTT 35773 | ||||| | |||||||| |||||||| | | || | ||||||||| Sbjct 350704 TGAGCCAGCACAAAGCTGTTGGGCGGAATAATGCATTC-GTCAGCCTT 350658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825896823137400