Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_022096.1
Length=258139
Score E
Sequences producing significant alignments: (Bits) Value
seq26 156 7e-33
seq22 156 7e-33
>seq26
Length=998041
Score = 156 bits (172), Expect = 7e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 35547 CCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACA 35606
||||||||||| || | ||| || || || || |||||||||| || | ||||||
Sbjct 19257 CCTTCGTTCGCATAGATACGGGCAGGAAGCGGCGTTGTGTTGCTGATTTCAATAGTCACC 19316
Query 35607 TGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAG 35666
|| |||||||| || ||||| || || || || || || |||||||| ||||| ||||||
Sbjct 19317 TGGCCTTCCCATTCGGGTTCAAGAGGGGTGACATTTACAATGATACCGCAGCGTGCGTAG 19376
Query 35667 GTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTG 35726
|| || || | |||||| || || || | ||||||||| ||||| ||||||| |||
Sbjct 19377 GTCGATTTGCCAAGACACACGACAAGAACATCGCGCGGAATACGGAAATATTCGATGGTG 19436
Query 35727 CGTGCCAGAGCGAAGCTGTTCGGCGGAATCA-GGATGCTGTCAGCCTT 35773
| ||||| | |||||||| |||||||| | | || | |||||||||
Sbjct 19437 TGAGCCAGCACAAAGCTGTTGGGCGGAATAATGCATTC-GTCAGCCTT 19483
>seq22
Length=1073832
Score = 156 bits (172), Expect = 7e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35547 CCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGTGTTGCTGAACTCCAGAGTCACA 35606
||||||||||| || | ||| || ||||| || |||||||||| || | |||||
Sbjct 350884 CCTTCGTTCGCATAGATACGGGCAGGCAGCGGCGTTGTGTTGCTGATTTCAATGGTCACC 350825
Query 35607 TGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGACGATGATACCACAGCGCGCGTAG 35666
|| |||||||| || ||||| || || || || || || |||||||| ||||| ||||||
Sbjct 350824 TGGCCTTCCCATTCGGGTTCAAGTGGGGTGACATTTACAATGATACCGCAGCGTGCGTAG 350765
Query 35667 GTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGGAATGCGGAAGTATTCGACCGTG 35726
|| || || | |||||| || || || | ||||||||| ||||| ||||||| |||
Sbjct 350764 GTCGATTTGCCTAGACACACGACAAGAACATCGCGCGGAATACGGAAATATTCGATGGTG 350705
Query 35727 CGTGCCAGAGCGAAGCTGTTCGGCGGAATCA-GGATGCTGTCAGCCTT 35773
| ||||| | |||||||| |||||||| | | || | |||||||||
Sbjct 350704 TGAGCCAGCACAAAGCTGTTGGGCGGAATAATGCATTC-GTCAGCCTT 350658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 825896823137400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |