Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq6 91.5 1e-13
>seq6
Length=3104374
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
||||||||||||||||| |||||| | || ||||| ||||| ||| | || ||| |
Sbjct 2898251 AAAATGCAAATTTTTGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGCCC 2898310
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|| || ||| | || || ||||| || || || ||| | ||| |||
Sbjct 2898311 TCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGAT 2898370
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|||||| | || || | || || || ||||||||||| | | || || | ||||||
Sbjct 2898371 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 2898430
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
||||| || |||||||| || ||||| |||||
Sbjct 2898431 AACATCCAGAAGGAGTCGACCCTGCACTTGGTG 2898463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398867393363215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |