Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_023688.1
Length=222006
Score E
Sequences producing significant alignments: (Bits) Value
seq15 84.2 3e-11
seq8 84.2 3e-11
>seq15
Length=1383265
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 1070650 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 1070591
Query 94961 GAACGG 94966
||||||
Sbjct 1070590 GAACGG 1070585
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 1183205 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 1183264
Query 94961 GAACGG 94966
||||||
Sbjct 1183265 GAACGG 1183270
>seq8
Length=1553183
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 408617 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 408558
Query 94961 GAACGG 94966
||||||
Sbjct 408557 GAACGG 408552
Score = 84.2 bits (92), Expect = 3e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 94901 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 94960
||||| || ||||||| || |||| ||||||||||||||| ||||||||| || ||||||
Sbjct 562067 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCGGTGTCCTAGGCCTCTAGAC 562126
Query 94961 GAACGG 94966
||||||
Sbjct 562127 GAACGG 562132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 710274019831600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |