Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq73 80.6 8e-11 seq15 80.6 8e-11 >seq73 Length=471550 Score = 80.6 bits (88), Expect = 8e-11 Identities = 70/86 (81%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 8569 GCGGGTATGGTGGAATTGGTAGACACGCTTGGTTTAGGTCCAAGTGCCTGAAAAGCTTGG 8628 |||||| ||||||||||||||||||||| | ||||||| | ||| | | || | ||| Sbjct 191946 GCGGGTGTGGTGGAATTGGTAGACACGCCAGATTTAGGTTCTGGTGGC-GCAAGCCGTGG 192004 Query 8629 GGGTTCGAGTCCCTCTACCCGCACCA 8654 |||||| |||||||| ||||| |||| Sbjct 192005 GGGTTCAAGTCCCTCCACCCGTACCA 192030 >seq15 Length=1383265 Score = 80.6 bits (88), Expect = 8e-11 Identities = 70/86 (81%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 8569 GCGGGTATGGTGGAATTGGTAGACACGCTTGGTTTAGGTCCAAGTGCCTGAAAAGCTTGG 8628 |||||| ||||||||||||||||||||| | ||||||| | ||| | | || | ||| Sbjct 380762 GCGGGTGTGGTGGAATTGGTAGACACGCCAGATTTAGGTTCTGGTGGC-GCAAGCCGTGG 380704 Query 8629 GGGTTCGAGTCCCTCTACCCGCACCA 8654 |||||| |||||||| ||||| |||| Sbjct 380703 GGGTTCAAGTCCCTCCACCCGTACCA 380678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146172641149600