Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_025436.1 Length=133824 Score E Sequences producing significant alignments: (Bits) Value seq39 84.2 2e-11 seq26 84.2 2e-11 >seq39 Length=736423 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 42198 TTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGAAAGTTCGAATC 42253 ||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 89821 TTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGCTGGTTCGAATC 89876 >seq26 Length=998041 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 42198 TTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGAAAGTTCGAATC 42253 ||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 454354 TTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGCTGGTTCGAATC 454409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428101903914975