Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq73 91.5 2e-13 seq15 91.5 2e-13 >seq73 Length=471550 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 13304 CGGGCGAATAACTCAGCGGTAGAGTGCCTCCTTTACACGGAGATTGTCGGGGGTTCGATC 13363 ||||||| || ||||||||||||| | ||| ||||||| ||||| | ||||||||||||| Sbjct 198911 CGGGCGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATC 198970 Query 13364 CCCTCTTCGCCCA 13376 ||||| ||||||| Sbjct 198971 CCCTCATCGCCCA 198983 >seq15 Length=1383265 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 13304 CGGGCGAATAACTCAGCGGTAGAGTGCCTCCTTTACACGGAGATTGTCGGGGGTTCGATC 13363 ||||||| || ||||||||||||| | ||| ||||||| ||||| | ||||||||||||| Sbjct 373797 CGGGCGATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGCCGGGGGTTCGATC 373738 Query 13364 CCCTCTTCGCCCA 13376 ||||| ||||||| Sbjct 373737 CCCTCATCGCCCA 373725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552460237044800