Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq111 120 1e-21 >seq111 Length=362587 Score = 120 bits (132), Expect = 1e-21 Identities = 125/163 (77%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | |||||| | | || ||||| | || |||||| | || || |||||||| Sbjct 244824 CAACTTTGCCGAGCGTATTATTGCCTTTGCAGCCGTGGAAGGAATCTTCTTCAGCGGCAG 244765 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| ||||| ||||| ||| |||| |||||||| || |||| |||||||||||| | Sbjct 244764 CTTT-GCCTCGATCTTTTGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCA 244706 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGC 443858 |||| |||||| ||| ||||| ||| | || |||||||| || Sbjct 244705 ACGAGCTGATCTCTCGTGACGAAGGTCTCCACTGCGACTTTGC 244663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588296621676075