Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq14 208 2e-48 seq234 194 5e-44 seq328 138 3e-27 seq23 131 5e-25 seq6 129 2e-24 seq139 127 6e-24 seq224 116 1e-20 seq8 113 1e-19 seq1293 109 2e-18 seq32 109 2e-18 seq154 86.0 2e-11 >seq14 Length=1523015 Score = 208 bits (230), Expect = 2e-48 Identities = 734/1132 (65%), Gaps = 31/1132 (3%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| || || || || ||||| || | ||| | || ||| Sbjct 1236656 GCTGTTGGTATTGATTTGGGCACAACCTACTCTTGCGTGGGTGTGTTCCAGCATGGCAAG 1236597 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || || || ||||| | || || ||||| || ||||| || || Sbjct 1236596 GTCGAGATCATTGCCAACGACCAGGGTAATCGTACCACACCATCCTATGTTGCCTTCACG 1236537 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| ||||||||||| | || || || || | || || |||| | Sbjct 1236536 GACACGGAGCGTTTGATTGGTGATGCCGCCAAGAACCAGGTGGCGATGAACCCAACTCAA 1236477 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434 ||| | || ||||| ||||| || || ||| | |||||| || | ||| | || Sbjct 1236476 ACGATCTTCGATGCCAAGCGTCTGATCGGTCGCAAGTTT----GAGGATTCTGCTGTGCA 1236421 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 ||||| | || || | || || || || ||| || || || | || Sbjct 1236420 GTCTGACATGAAGCACTGGCCCTTCGACGTGGTCAGTGTAGATGGC---AAGCCCAAGAT 1236364 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 ||||||| || || | ||| | || || || ||||| || || || || ||||| Sbjct 1236363 TGAGGTTACGTACAAGGATGAGAAGAAGACCTTCTTCCCCGAGGAGATCTCCTCCATGGT 1236304 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 || ||||||||||| | || || || || | || | || || || |||| || Sbjct 1236303 GTTGACCAAAATGAAGGAGACCGCCGAGGCGTACCTGGGCAAGACGGTGACCAATGCCGT 1236244 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || ||||| |||||||| || || || | |||||| || || || || || || | Sbjct 1236243 CATCACTGTGCCAGCCTACTTCAACGACTCGCAGCGTCAGGCGACCAAGGACGCCGGTAC 1236184 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 |||||| || || ||||| || | || || || || || || || || || || || || Sbjct 1236183 CATTGCCGGATTGAATGTGCTGCGTATCATCAACGAGCCGACGGCCGCTGCTATCGCCTA 1236124 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 ||| || || || | | || || ||| | || ||||| ||| | ||||| || Sbjct 1236123 TGGCCTGGACAAGAAGGCTGTTGGTGAGCGTAATGTGCTCATTTTCGATCTGGGTGGCGG 1236064 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 ||| || ||||| || | || | | || || || || || || || ||| | || || Sbjct 1236063 TACCTTCGATGTGTCCATTCTGTCGATCGATGACGGCATCTTCGAGGTCAAATCTACGGC 1236004 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 |||||||| ||||||||||| || ||||| || || ||||| || | || ||||| | Sbjct 1236003 CGGTGATACCCATCTTGGTGGTGAGGATTTCGACAACCGTCTAGTGACCCACTTTGTGCA 1235944 Query 349915 AGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATC--CTA--GAGCAATGCGT 349969 || || ||||| ||||| || | ||| | || | | | | | || ||||| Sbjct 1235943 GGAGTTCAAGCG-CAAGCACAAGAAGGATCT----GACCACCAACAAGCGTGCTCTGCGT 1235889 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || | || || || || || || |||||| || | || || | ||||| || Sbjct 1235888 CGTCTGCGCACCGCCTGCGAGCGCGCAAAGCGTACCCTCTCCTCGTCCACCCAGGCCAGC 1235829 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 ||||| ||||||||||| || || | ||||||| | || || || ||||| || Sbjct 1235828 ATTGAGATTGATTCTCTGTTCGAGGGTACCGATTTCTACACCTCGATCACTCGTGCCCGT 1235769 Query 350090 TTTGAAGAATTATGTATG--GATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTA 350146 || || || || | | ||||| || | ||| || ||||| || ||||| || | Sbjct 1235768 TTCGAGGA--GCTGAACGCTGATCTGTTCCGCAGC-ACCATGGACCCCGTGGAGAAGGCT 1235712 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAG--ATTGATGAAGTAGTTTTAGTTGGTGGTT 350204 | || || || || | || || | || | || | || | || ||||| | Sbjct 1235711 CTGCGTGACGCCAAGCTG--GACAAGTCGGCCATCCACGACATTGTGCTGGTCGGTGGCT 1235654 Query 350205 CTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTT 350264 | || ||||| || || || || | | || || | || || ||||| || | Sbjct 1235653 CCACCCGTATCCCCAAGGTGCAGCGTCTGCTCCAGGATCTGTTCAACGGCAAGGAGCTGA 1235594 Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 | || || ||||| ||||| |||||||| |||||||| || || ||||| Sbjct 1235593 ACAAGTCGATCAATCCCGATGAGGCTGTTGCCTATGGTGCCGCCGTCCAGGC 1235542 >seq234 Length=227530 Score = 194 bits (214), Expect = 5e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | ||| | || ||||| || ||||| |||||||||||| Sbjct 9909 CCACCACGAAGCCGCAGTACCAAATGCAAGGTGGACTCCTTCTGAATGTTATAATCAGAT 9968 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | |||||| |||||||| | |||||| ||||| ||||| | ||||| ||||| |||||| Sbjct 9969 AGTGTTCGGCCATCTTCCAATTGTTTGCCAGCGAAGATCAAGCGTTGTTGATCTGGAGGA 10028 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 ||||||||||| |||||||| || ||||| ||||| || || | ||| || ||||| || Sbjct 10029 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACC 10088 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || |||||||| |||||||| Sbjct 10089 TCAAGAGTTATGGTCTTGCCCGTAAGGGTCTTTACAAAGATCTGCAT 10135 >seq328 Length=165906 Score = 138 bits (152), Expect = 3e-27 Identities = 294/435 (68%), Gaps = 8/435 (2%) Strand=Plus/Minus Query 204909 ACATAAATTACTAGACTTAATAGTACCAAGGTTTTGTTGATTTGTTTTATAATTAACAGC 204968 |||||||||||| | |||||||| |||| ||||||||||| | || |||| | Sbjct 106434 ACATAAATTACTGCATTTAATAGTGCCAACATTTTGTTGATTGCTCTTTCTATTACAGGA 106375 Query 204969 ATCTTTATATAACATATATGGTGTACCTGTTTCCATTTGCGAATCTAAAATTTTGATCCA 205028 ||| ||| | | ||| ||||| |||| ||||| | |||||| |||| ||| | ||| Sbjct 106374 ATCCTTAAAAAGCATGTATGGGTTACCAGTTTCAACTTGCGATTCTATAATGGCAAACCA 106315 Query 205029 TAAATCACGAGCattaa---tttgtttagtaaataaattttttgattcatatttgagata 205085 ||| |||| || | || | |||| | | | || |||||||||| ||| Sbjct 106314 TAACGACTGAGCTTTCACTGTTCGATTAGCACGTCCCTCTTGC---TCATATTTGACATA 106258 Query 205086 taattttttataattatCTCCATAA-CATTCTGATAATCCAGGTGTTCTATCTGGACAAA 205144 | || | | | || || || || ||| ||| | |||||| | ||| |||||| | Sbjct 106257 AAGTTGCTCAAATTTTTCGCCCCAAACATCTTGA-AGTCCAGGACATTTATGTGGACACA 106199 Query 205145 ATAATGACCATTTGCTATTAGTATGTACTCTTTCCATAAACAGATCTGAAATCCAAAGAG 205204 || ||||| || ||| | | || | || ||| || ||||| | |||||| | || Sbjct 106198 TCAACGACCAGTTTTCATTTGCTTCAACCCGTTTCATGAAAAGATCGGGAATCCATAAAG 106139 Query 205205 CATAAAAAAGGTCACGAGCGCGAAGTTCTTCGTCTCCATGATTTTTCTTTAAATCTAAAA 205264 |||||||||| || || || || |||||| | |||| ||| | || | ||||||| Sbjct 106138 CATAAAAAAGATCCCGTGCTCGGTTTTCTTCTTTTCCAGTGTTTCTTTTGAGGTCTAAAA 106079 Query 205265 ATTCTTCAATATCCGGATGATGTGGTTCAATATACATAGCAAAACTTCCAGCTCTTTTTC 205324 |||| || ||| | ||| || || | ||| |||||||| |||| |||||||| Sbjct 106078 ATTCAAAAACATCTGAATGCCAGGGCTCTAAATAAATAGCAAAGGCACCAGGTCTTTTTC 106019 Query 205325 CACCACCATTATGAA 205339 |||| || | || || Sbjct 106018 CACCTCCCTGATCAA 106004 Score = 91.5 bits (100), Expect = 4e-13 Identities = 191/280 (68%), Gaps = 6/280 (2%) Strand=Plus/Minus Query 206448 CTGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAA-TAATACCATTAG 206506 ||| |||| |||||| || ||||||||||| | |||||| |||| |||| ||||| | Sbjct 106011 CTGATCAACATATCGTGCCACATTATTAAATACTCTTAGCATTGGAACTAAT-CCATTTG 105953 Query 206507 AAGTTCCATTTGTTCCTCTAATATG--ACTGCCAGTCCCTCTAATATTATGTATATGTAA 206564 |||| || || ||||| | ||||| | |||| | | | |||| ||| | || | Sbjct 105952 AAGTACCGTTCGTTCCAC--ATATGGAAGTGCCTTTGGCACGAATACAATGAACATTAAG 105895 Query 206565 TCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCC 206624 ||||||||| || || |||| ||||| | ||||||| || | || ||| |||| || Sbjct 105894 TCCAATTCCACCCGCTGATTTGGAAATCATTGCACATTGTTCAACTGATTTAAAAATACC 105835 Query 206625 ATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGT 206684 |||| ||| | ||| | | | |||||| || || ||| || || || Sbjct 105834 TTCAATTGAATCCGAATTCATTGTCAAAAGAAAACATGAGGATAGTTGAGGGCGATTTGT 105775 Query 206685 TCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATAT 206724 ||||| ||| | ||| || | ||||| ||||||||| Sbjct 105774 AGCAGCAGCAAAAAGAGTTGGCGAGGCATGCGTAAAATAT 105735 >seq23 Length=1278451 Score = 131 bits (144), Expect = 5e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 || ||||| || | | || || | ||| ||||||||||| || || || || || ||| Sbjct 1263176 ATTCCACCGCGGAGACGCAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCA 1263235 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || || || || ||||| ||||| ||||| || || Sbjct 1263236 GAAAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGG 1263295 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || ||||| || || ||||| || || || || || || ||||| | || ||||| ||| Sbjct 1263296 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCA 1263355 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | || || ||||| || || || ||||| |||||||| Sbjct 1263356 ACCTCCAGGGTGATGGTTTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 1263405 >seq6 Length=3104374 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || | || || || ||||| || || || || || || Sbjct 2898483 ATACCACCACGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG 2898424 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || || || || ||||| ||||| |||||||| || Sbjct 2898423 GACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 2898364 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || || ||||| || ||||| || ||||| || || | ||||| || || Sbjct 2898363 GGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCG 2898304 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || | || | ||||| || || || ||||| |||||||| |||||| Sbjct 2898303 ACCTCCAAGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAAATTTGCATT 2898253 >seq139 Length=282105 Score = 127 bits (140), Expect = 6e-24 Identities = 711/1129 (63%), Gaps = 22/1129 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| |||||||| || || || || || || || || | ||| | || | | Sbjct 280275 GCTATTGGAATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAGCACGGAAAG 280216 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||| || || ||| | || ||||| || || ||||| || Sbjct 280215 GTGGAGATTATCGCCAATGACCAGGGAAACCGGACGACGCCCAGCTATGTGGCATTCACA 280156 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | |||||| ||||||| || | || || || || | || || || | || Sbjct 280155 GAGTCGGAGCGTCTGATTGGCGACGCCGCCAAGAACCAGGTGGCAATGAACCCGATGAAC 280096 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACACAA 349435 || ||||| ||||| ||||| || ||||| | |||| | | ||| | || | Sbjct 280095 ACAGTTTTCGATGCCAAGCGCCTGATTGGGCGCAAGTACGACGATCCCAAGATTGCAGAG 280036 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || | || || | || || | || || || || || | || || | ||| Sbjct 280035 ---GACATCAAGCACTGGCCGTTCAAGGTGGT---AAGCGATGGGGGCAAGCCCAAGATT 279982 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 | ||||| | || || |||| || | |||| || || || || || ||||| Sbjct 279981 GGCGTTGAGTTCAAGGGCGAACCGAAGCGCTTTTCCCCGGAGGAGATCAGCTCGATGGTG 279922 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | || ||||||||||| | || || || ||| | || |||| | || || || || Sbjct 279921 CTGGTCAAAATGAAGGAGACGGCCGAGGCTTATCTGGGCGAAAGCATCACAGACGCAGTC 279862 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 || || || || ||||| || || || | ||||| || || || ||||||||| || Sbjct 279861 ATCACAGTGCCTGCCTACTTCAACGACTCACAGCGCCAGGCCACGAAGGATGCTGGCCGC 279802 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || || || | ||||| || ||||| | ||||| || || || || || | || ||| Sbjct 279801 ATCGCAGGCCTCAATGTGCTCAGAATCGTCAATGAGCCGACGGCGGCCGCGCTAGCCTAT 279742 Query 349736 GGGCTTGATAAAA---TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || | ||| | | || ||| | || || || || | || || Sbjct 279741 GGACTGGACAAGAATCTGAAGGGC---GAGCGCAATGTGCTCATCTTCGACCTGGGCGGC 279685 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCA 349849 || || ||||| || || | || || | || |||||| | ||||| || || Sbjct 279684 GGAACCTTTGACGTGTCCATCCTGACCATCGACGAGGGATCCCTGTTTGAGGTGCGGGCC 279625 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 ||||| || || || ||||| || || ||||| || || || || || || | || | Sbjct 279624 ACTGCCGGAGACACCCATCTGGGCGGCGAAGACTTCGACAACCGACTGGTCACACACCTG 279565 Query 349910 GTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969 | | || ||||||||| || || | ||| | | || ||| | || |||| Sbjct 279564 GCAGATGAGTTTAAGCGTAAATACAAGAAGGATCTGCGCACCAACCCTCGTGCTCTGCGA 279505 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 ||||| |||| ||| || || || ||||| || | || || | || | | | Sbjct 279504 CGCCTCCGAACGGCGGCCGAGCGGGCCAAGCGCACCCTCTCCTCCAGCACGGAGGCGACC 279445 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 ||||| || ||| |||| || ||| | || | || | || | || || || Sbjct 279444 ATTGAGATAGATGCTCTGTTCGAGGGCCACGACTACTACACCAAGATGAGCCGCGCACGC 279385 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 || || ||| | || || || || || ||| || | || ||||| || | | Sbjct 279384 TTCGAGGAACTGTGCGCAGACCTCTTCAGGAACACATTGCAGCCGGTGGAGAAGGCCCTC 279325 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 || ||||| || ||| ||| | ||||| |||| | || | || || || || || Sbjct 279324 AACGATGCCAAGATGGACAAGAGCCAGATCCATGACATCGTGCTCGTAGGCGGCTCCACG 279265 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA-- 350267 || ||||| ||||| || | || |||| || || || ||||| || || | Sbjct 279264 CGCATTCCGAAAGTGCAGAGCCTCCTCCAACAGTTCTTCAACGG-AAAGAGCC-TCAACC 279207 Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 || || |||||||| || || || || || || |||||||| ||||| Sbjct 279206 TGTCCATCAATCCAGACGAGGCGGTGGCCTACGGGGCTGCTGTCCAGGC 279158 Score = 122 bits (134), Expect = 3e-22 Identities = 710/1129 (63%), Gaps = 22/1129 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| |||||||| || || || || || || || || | ||| | || | | Sbjct 276272 GCTATTGGAATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAGCACGGAAAG 276213 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||| || || ||| | || ||||| || || ||||| || Sbjct 276212 GTGGAGATTATCGCCAATGACCAGGGAAACCGGACGACGCCCAGCTATGTGGCATTCACA 276153 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | |||||| ||||||| || | || || || || | || || || | || Sbjct 276152 GAGTCGGAGCGTCTGATTGGCGACGCCGCCAAGAACCAGGTGGCAATGAACCCGATGAAC 276093 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACACAA 349435 || ||||| ||||| ||||| || ||||| | |||| | | ||| | || | Sbjct 276092 ACAGTTTTCGATGCCAAGCGCCTGATTGGGCGCAAGTACGACGATCCCAAGATTGCAGAG 276033 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || | || || | || || | || || || || || | || || | ||| Sbjct 276032 ---GACATCAAGCACTGGCCGTTCAAGGTGGT---AAGCGATGGGGGCAAGCCCAAGATT 275979 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 | ||||| | || || |||| || | |||| || | || || || ||||| Sbjct 275978 GGCGTTGAGTTCAAGGGCGAACCGAAGCGCTTTTCTCCGTAGGAGATCAGCTCGATGGTG 275919 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | || ||||||||||| | || || || ||| | || |||| | || || || || Sbjct 275918 CTGGTCAAAATGAAGGAGACGGCCGAGGCTTATCTGGGCGAAAGCATCACAGACGCAGTC 275859 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 || || || || ||||| || || || | ||||| || || || ||||||||| || Sbjct 275858 ATCACAGTGCCTGCCTACTTCAACGACTCACAGCGCCAGGCCACGAAGGATGCTGGCCGC 275799 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || || || | ||||| || ||||| | ||||| || || || || || | || ||| Sbjct 275798 ATCGCAGGCCTCAATGTGCTCAGAATCGTCAATGAGCCGACGGCGGCCGCGCTAGCCTAT 275739 Query 349736 GGGCTTGATAAAA---TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || | ||| | | || ||| | || || || || | || || Sbjct 275738 GGACTGGACAAGAATCTGAAGGGC---GAGCGCAATGTGCTCATCTTCGACCTGGGCGGC 275682 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCA 349849 || || ||||| || || | || || | || |||||| | ||||| || || Sbjct 275681 GGAACCTTTGACGTGTCCATCCTGACCATCGACGAGGGATCCCTGTTTGAGGTGCGGGCC 275622 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 ||||| || || || ||||| || || ||||| || || || || || || | || | Sbjct 275621 ACTGCCGGAGACACCCATCTGGGCGGCGAAGACTTCGACAACCGACTGGTCACACACCTG 275562 Query 349910 GTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969 | | || ||||||||| || || | ||| | | || ||| | || |||| Sbjct 275561 GCAGATGAGTTTAAGCGTAAATACAAGAAGGATCTGCGCACCAACCCTCGTGCTCTGCGA 275502 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 ||||| |||| ||| || || || ||||| || | || || | || | | | Sbjct 275501 CGCCTCCGAACGGCGGCCGAGCGGGCCAAGCGCACCCTCTCCTCCAGCACGGAGGCGACC 275442 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 ||||| || ||| |||| || ||| | || | || | || | || || || Sbjct 275441 ATTGAGATAGATGCTCTGTTCGAGGGCCACGACTACTACACCAAGATGAGCCGCGCACGC 275382 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 || || ||| | || || || || || ||| || | || ||||| || | | Sbjct 275381 TTCGAGGAACTGTGCGCAGACCTCTTCAGGAACACATTGCAGCCGGTGGAGAAGGCCCTC 275322 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 || ||||| || ||| ||| | ||||| |||| | || | || || || || || Sbjct 275321 AACGATGCCAAGATGGACAAGAGCCAGATCCATGACATCGTGCTCGTAGGCGGCTCCACG 275262 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA-- 350267 || ||||| ||||| || | || |||| || || || ||||| || || | Sbjct 275261 CGCATTCCGAAAGTGCAGAGCCTCCTCCAACAGTTCTTCAACGG-AAAGAGCC-TCAACC 275204 Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 || || |||||||| || || || || || || |||||||| ||||| Sbjct 275203 TGTCCATCAATCCAGACGAGGCGGTGGCCTACGGGGCTGCTGTCCAGGC 275155 >seq224 Length=190040 Score = 116 bits (128), Expect = 1e-20 Identities = 231/341 (68%), Gaps = 6/341 (2%) Strand=Plus/Minus Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||||| | ||| |||||||||| ||| || || || | ||||||| ||| || | || Sbjct 57840 GTTTTGGGTAAGATGAAGGAAACTGCCGAGGCTTACCTTGGTGAAAAAGTGACGCAGGCC 57781 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || |||||||| || || || ||||| |||||||||||| ||||| || ||||| || Sbjct 57780 GTCATTACTGTTCCGGCTTACTTTAACGATGCCCAGCGTCAGGCAACCAAGGATGCCGGT 57721 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 | ||||| || | | || || | || ||||| ||||| || ||||| || |||| Sbjct 57720 CGTATTGCTGGCCTTGAAGTGCTGCGTATCATTAACGAACCAACCGCTGCTGCCCTTGCC 57661 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 ||||| | || || | || | | | | | || | ||| ||| | |||||| Sbjct 57660 TATGGCATGGAAAAGAAAAGCGGC--GGCACA----GTTGCTGTTTATGACCTTGGTGGT 57607 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 || || || || || || | || | || || || | | ||||| ||| | || Sbjct 57606 GGCACGTTCGACGTTTCCGTTCTGGAAATTTCTGACGGCGTGATCGAAGTGAAATCCACA 57547 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 |||||||| |||||||| |||||||| ||||| || Sbjct 57546 AACGGTGATACGTTCCTTGGTGGTGAAGATTTCGATAACCG 57506 >seq8 Length=1553183 Score = 113 bits (124), Expect = 1e-19 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||||| | ||| |||||||||| ||| || || || | ||||||| ||| || | || Sbjct 763546 GTTTTGGGTAAGATGAAGGAAACTGCCGAGGCTTACCTTGGTGAAAAAGTGACGCAGGCC 763487 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || |||||||| || || || ||||| |||||||||||| ||||| || ||||| || Sbjct 763486 GTCATTACTGTTCCGGCTTACTTTAACGATGCCCAGCGTCAGGCAACCAAGGATGCCGGT 763427 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 | ||||| || | | || || | || ||||| ||||| || ||||| || |||| Sbjct 763426 CGTATTGCTGGCCTTGAAGTGCTGCGTATCATTAACGAACCAACCGCTGCTGCCCTTGCC 763367 Query 349733 TATGG 349737 ||||| Sbjct 763366 TATGG 763362 >seq1293 Length=3713 Score = 109 bits (120), Expect = 2e-18 Identities = 193/281 (69%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || || || | ||||| | | || |||||||||| ||||| || ||| | Sbjct 2958 CCCGAGGAGATCTCTGCCATGGTCCTCGGCAAGATGAAGGAAACCGCTGAGGCTTATCTC 2899 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || | || || | || || || ||||| || || |||||||||||| Sbjct 2898 GGCAAGAAGGTCACCCACGCCGTGGTCACAGTGCCGGCCTACTTCAACGATGCCCAGCGT 2839 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||||||| |||||| || | ||||| | | || || || ||| Sbjct 2838 CAAGCCACCAAGGATGCTGGCGTCATTGCCGGTCTCAATGTAATGCGCATCATCAACGAA 2779 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || ||||| || || ||||| || || || ||||| ||| || || || ||| | Sbjct 2778 CCGACTGCCGCTGCCATTGCTTACGGCCTCGATAA---GAGGGAGGGCGAGAAGAATGTG 2722 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACT 349812 || | || ||| | || || |||||||| ||||| || || Sbjct 2721 CTGGTGTTCGATCTGGGCGGCGGTACTTTCGATGTCTCCCT 2681 >seq32 Length=1341622 Score = 109 bits (120), Expect = 2e-18 Identities = 193/281 (69%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || || || | ||||| | | || |||||||||| ||||| || ||| | Sbjct 768180 CCCGAGGAGATCTCTGCCATGGTCCTCGGCAAGATGAAGGAAACCGCTGAGGCTTATCTC 768121 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || | || || | || || || ||||| || || |||||||||||| Sbjct 768120 GGCAAGAAGGTCACCCACGCCGTGGTCACAGTGCCGGCCTACTTCAACGATGCCCAGCGT 768061 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||||||| |||||| || | ||||| | | || || || ||| Sbjct 768060 CAAGCCACCAAGGATGCTGGCGTCATTGCCGGTCTCAATGTAATGCGCATCATCAACGAA 768001 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || ||||| || || ||||| || || || ||||| ||| || || || ||| | Sbjct 768000 CCGACTGCCGCTGCCATTGCTTACGGCCTCGATAA---GAGGGAGGGCGAGAAGAATGTG 767944 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACT 349812 || | || ||| | || || |||||||| ||||| || || Sbjct 767943 CTGGTGTTCGATCTGGGCGGCGGTACTTTCGATGTCTCCCT 767903 >seq154 Length=283319 Score = 86.0 bits (94), Expect = 2e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 239483 TTAAATCAATTCTTCCAGGACGAATTAATGCTGGATCTAAACTATCATAATTATTACTTG 239542 ||||||||||||||||||| || ||||||||||||||||| | ||| ||| |||| ||| Sbjct 179413 TTAAATCAATTCTTCCAGGTCGTATTAATGCTGGATCTAAGCGATCTAAATAATTAGTTG 179472 Query 239543 TTATAATCATAATTCTA 239559 | |||| | ||||||| Sbjct 179473 TCATAAATACAATTCTA 179489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515216833528805