Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq14 208 2e-48
seq234 194 5e-44
seq328 138 3e-27
seq23 131 5e-25
seq6 129 2e-24
seq139 127 6e-24
seq224 116 1e-20
seq8 113 1e-19
seq1293 109 2e-18
seq32 109 2e-18
seq154 86.0 2e-11
>seq14
Length=1523015
Score = 208 bits (230), Expect = 2e-48
Identities = 734/1132 (65%), Gaps = 31/1132 (3%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||| | || || ||||| || || || || ||||| || | ||| | || |||
Sbjct 1236656 GCTGTTGGTATTGATTTGGGCACAACCTACTCTTGCGTGGGTGTGTTCCAGCATGGCAAG 1236597
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || ||||| || || || ||||| | || || ||||| || ||||| || ||
Sbjct 1236596 GTCGAGATCATTGCCAACGACCAGGGTAATCGTACCACACCATCCTATGTTGCCTTCACG 1236537
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| ||||||||||| | || || || || | || || |||| |
Sbjct 1236536 GACACGGAGCGTTTGATTGGTGATGCCGCCAAGAACCAGGTGGCGATGAACCCAACTCAA 1236477
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434
||| | || ||||| ||||| || || ||| | |||||| || | ||| | ||
Sbjct 1236476 ACGATCTTCGATGCCAAGCGTCTGATCGGTCGCAAGTTT----GAGGATTCTGCTGTGCA 1236421
Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494
||||| | || || | || || || || ||| || || || | ||
Sbjct 1236420 GTCTGACATGAAGCACTGGCCCTTCGACGTGGTCAGTGTAGATGGC---AAGCCCAAGAT 1236364
Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554
||||||| || || | ||| | || || || ||||| || || || || |||||
Sbjct 1236363 TGAGGTTACGTACAAGGATGAGAAGAAGACCTTCTTCCCCGAGGAGATCTCCTCCATGGT 1236304
Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614
|| ||||||||||| | || || || || | || | || || || |||| ||
Sbjct 1236303 GTTGACCAAAATGAAGGAGACCGCCGAGGCGTACCTGGGCAAGACGGTGACCAATGCCGT 1236244
Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674
|| ||||| |||||||| || || || | |||||| || || || || || || |
Sbjct 1236243 CATCACTGTGCCAGCCTACTTCAACGACTCGCAGCGTCAGGCGACCAAGGACGCCGGTAC 1236184
Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734
|||||| || || ||||| || | || || || || || || || || || || || ||
Sbjct 1236183 CATTGCCGGATTGAATGTGCTGCGTATCATCAACGAGCCGACGGCCGCTGCTATCGCCTA 1236124
Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794
||| || || || | | || || ||| | || ||||| ||| | ||||| ||
Sbjct 1236123 TGGCCTGGACAAGAAGGCTGTTGGTGAGCGTAATGTGCTCATTTTCGATCTGGGTGGCGG 1236064
Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854
||| || ||||| || | || | | || || || || || || || ||| | || ||
Sbjct 1236063 TACCTTCGATGTGTCCATTCTGTCGATCGATGACGGCATCTTCGAGGTCAAATCTACGGC 1236004
Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914
|||||||| ||||||||||| || ||||| || || ||||| || | || ||||| |
Sbjct 1236003 CGGTGATACCCATCTTGGTGGTGAGGATTTCGACAACCGTCTAGTGACCCACTTTGTGCA 1235944
Query 349915 AGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATC--CTA--GAGCAATGCGT 349969
|| || ||||| ||||| || | ||| | || | | | | | || |||||
Sbjct 1235943 GGAGTTCAAGCG-CAAGCACAAGAAGGATCT----GACCACCAACAAGCGTGCTCTGCGT 1235889
Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029
|| || | || || || || || || |||||| || | || || | ||||| ||
Sbjct 1235888 CGTCTGCGCACCGCCTGCGAGCGCGCAAAGCGTACCCTCTCCTCGTCCACCCAGGCCAGC 1235829
Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089
||||| ||||||||||| || || | ||||||| | || || || ||||| ||
Sbjct 1235828 ATTGAGATTGATTCTCTGTTCGAGGGTACCGATTTCTACACCTCGATCACTCGTGCCCGT 1235769
Query 350090 TTTGAAGAATTATGTATG--GATCTTTTTAG-AGCAACAATGGATCCTGTGGAAAAAGTA 350146
|| || || || | | ||||| || | ||| || ||||| || ||||| || |
Sbjct 1235768 TTCGAGGA--GCTGAACGCTGATCTGTTCCGCAGC-ACCATGGACCCCGTGGAGAAGGCT 1235712
Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAG--ATTGATGAAGTAGTTTTAGTTGGTGGTT 350204
| || || || || | || || | || | || | || | || ||||| |
Sbjct 1235711 CTGCGTGACGCCAAGCTG--GACAAGTCGGCCATCCACGACATTGTGCTGGTCGGTGGCT 1235654
Query 350205 CTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTT 350264
| || ||||| || || || || | | || || | || || ||||| || |
Sbjct 1235653 CCACCCGTATCCCCAAGGTGCAGCGTCTGCTCCAGGATCTGTTCAACGGCAAGGAGCTGA 1235594
Query 350265 CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316
| || || ||||| ||||| |||||||| |||||||| || || |||||
Sbjct 1235593 ACAAGTCGATCAATCCCGATGAGGCTGTTGCCTATGGTGCCGCCGTCCAGGC 1235542
>seq234
Length=227530
Score = 194 bits (214), Expect = 5e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570
|||||||| | | || || | ||| | || ||||| || ||||| ||||||||||||
Sbjct 9909 CCACCACGAAGCCGCAGTACCAAATGCAAGGTGGACTCCTTCTGAATGTTATAATCAGAT 9968
Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630
| |||||| |||||||| | |||||| ||||| ||||| | ||||| ||||| ||||||
Sbjct 9969 AGTGTTCGGCCATCTTCCAATTGTTTGCCAGCGAAGATCAAGCGTTGTTGATCTGGAGGA 10028
Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690
||||||||||| |||||||| || ||||| ||||| || || | ||| || ||||| ||
Sbjct 10029 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACC 10088
Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || || |||||||| ||||||||
Sbjct 10089 TCAAGAGTTATGGTCTTGCCCGTAAGGGTCTTTACAAAGATCTGCAT 10135
>seq328
Length=165906
Score = 138 bits (152), Expect = 3e-27
Identities = 294/435 (68%), Gaps = 8/435 (2%)
Strand=Plus/Minus
Query 204909 ACATAAATTACTAGACTTAATAGTACCAAGGTTTTGTTGATTTGTTTTATAATTAACAGC 204968
|||||||||||| | |||||||| |||| ||||||||||| | || |||| |
Sbjct 106434 ACATAAATTACTGCATTTAATAGTGCCAACATTTTGTTGATTGCTCTTTCTATTACAGGA 106375
Query 204969 ATCTTTATATAACATATATGGTGTACCTGTTTCCATTTGCGAATCTAAAATTTTGATCCA 205028
||| ||| | | ||| ||||| |||| ||||| | |||||| |||| ||| | |||
Sbjct 106374 ATCCTTAAAAAGCATGTATGGGTTACCAGTTTCAACTTGCGATTCTATAATGGCAAACCA 106315
Query 205029 TAAATCACGAGCattaa---tttgtttagtaaataaattttttgattcatatttgagata 205085
||| |||| || | || | |||| | | | || |||||||||| |||
Sbjct 106314 TAACGACTGAGCTTTCACTGTTCGATTAGCACGTCCCTCTTGC---TCATATTTGACATA 106258
Query 205086 taattttttataattatCTCCATAA-CATTCTGATAATCCAGGTGTTCTATCTGGACAAA 205144
| || | | | || || || || ||| ||| | |||||| | ||| |||||| |
Sbjct 106257 AAGTTGCTCAAATTTTTCGCCCCAAACATCTTGA-AGTCCAGGACATTTATGTGGACACA 106199
Query 205145 ATAATGACCATTTGCTATTAGTATGTACTCTTTCCATAAACAGATCTGAAATCCAAAGAG 205204
|| ||||| || ||| | | || | || ||| || ||||| | |||||| | ||
Sbjct 106198 TCAACGACCAGTTTTCATTTGCTTCAACCCGTTTCATGAAAAGATCGGGAATCCATAAAG 106139
Query 205205 CATAAAAAAGGTCACGAGCGCGAAGTTCTTCGTCTCCATGATTTTTCTTTAAATCTAAAA 205264
|||||||||| || || || || |||||| | |||| ||| | || | |||||||
Sbjct 106138 CATAAAAAAGATCCCGTGCTCGGTTTTCTTCTTTTCCAGTGTTTCTTTTGAGGTCTAAAA 106079
Query 205265 ATTCTTCAATATCCGGATGATGTGGTTCAATATACATAGCAAAACTTCCAGCTCTTTTTC 205324
|||| || ||| | ||| || || | ||| |||||||| |||| ||||||||
Sbjct 106078 ATTCAAAAACATCTGAATGCCAGGGCTCTAAATAAATAGCAAAGGCACCAGGTCTTTTTC 106019
Query 205325 CACCACCATTATGAA 205339
|||| || | || ||
Sbjct 106018 CACCTCCCTGATCAA 106004
Score = 91.5 bits (100), Expect = 4e-13
Identities = 191/280 (68%), Gaps = 6/280 (2%)
Strand=Plus/Minus
Query 206448 CTGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAA-TAATACCATTAG 206506
||| |||| |||||| || ||||||||||| | |||||| |||| |||| ||||| |
Sbjct 106011 CTGATCAACATATCGTGCCACATTATTAAATACTCTTAGCATTGGAACTAAT-CCATTTG 105953
Query 206507 AAGTTCCATTTGTTCCTCTAATATG--ACTGCCAGTCCCTCTAATATTATGTATATGTAA 206564
|||| || || ||||| | ||||| | |||| | | | |||| ||| | || |
Sbjct 105952 AAGTACCGTTCGTTCCAC--ATATGGAAGTGCCTTTGGCACGAATACAATGAACATTAAG 105895
Query 206565 TCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCC 206624
||||||||| || || |||| ||||| | ||||||| || | || ||| |||| ||
Sbjct 105894 TCCAATTCCACCCGCTGATTTGGAAATCATTGCACATTGTTCAACTGATTTAAAAATACC 105835
Query 206625 ATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGT 206684
|||| ||| | ||| | | | |||||| || || ||| || || ||
Sbjct 105834 TTCAATTGAATCCGAATTCATTGTCAAAAGAAAACATGAGGATAGTTGAGGGCGATTTGT 105775
Query 206685 TCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATAT 206724
||||| ||| | ||| || | ||||| |||||||||
Sbjct 105774 AGCAGCAGCAAAAAGAGTTGGCGAGGCATGCGTAAAATAT 105735
>seq23
Length=1278451
Score = 131 bits (144), Expect = 5e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
|| ||||| || | | || || | ||| ||||||||||| || || || || || |||
Sbjct 1263176 ATTCCACCGCGGAGACGCAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCA 1263235
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || ||||| || || || || || || ||||| ||||| ||||| || ||
Sbjct 1263236 GAAAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGG 1263295
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
|| ||||| || || ||||| || || || || || || ||||| | || ||||| |||
Sbjct 1263296 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCA 1263355
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || | || || ||||| || || || ||||| ||||||||
Sbjct 1263356 ACCTCCAGGGTGATGGTTTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 1263405
>seq6
Length=3104374
Score = 129 bits (142), Expect = 2e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||||||||| | | || || | || || || ||||| || || || || || ||
Sbjct 2898483 ATACCACCACGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG 2898424
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || ||||| || || || || || || ||||| ||||| |||||||| ||
Sbjct 2898423 GACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 2898364
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687
||||| || || || ||||| || ||||| || ||||| || || | ||||| || ||
Sbjct 2898363 GGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCG 2898304
Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || | || | ||||| || || || ||||| |||||||| ||||||
Sbjct 2898303 ACCTCCAAGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAAATTTGCATT 2898253
>seq139
Length=282105
Score = 127 bits (140), Expect = 6e-24
Identities = 711/1129 (63%), Gaps = 22/1129 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| |||||||| || || || || || || || || | ||| | || | |
Sbjct 280275 GCTATTGGAATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAGCACGGAAAG 280216
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || || || ||||| || || ||| | || ||||| || || ||||| ||
Sbjct 280215 GTGGAGATTATCGCCAATGACCAGGGAAACCGGACGACGCCCAGCTATGTGGCATTCACA 280156
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| | |||||| ||||||| || | || || || || | || || || | ||
Sbjct 280155 GAGTCGGAGCGTCTGATTGGCGACGCCGCCAAGAACCAGGTGGCAATGAACCCGATGAAC 280096
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACACAA 349435
|| ||||| ||||| ||||| || ||||| | |||| | | ||| | || |
Sbjct 280095 ACAGTTTTCGATGCCAAGCGCCTGATTGGGCGCAAGTACGACGATCCCAAGATTGCAGAG 280036
Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495
|| | || || | || || | || || || || || | || || | |||
Sbjct 280035 ---GACATCAAGCACTGGCCGTTCAAGGTGGT---AAGCGATGGGGGCAAGCCCAAGATT 279982
Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555
| ||||| | || || |||| || | |||| || || || || || |||||
Sbjct 279981 GGCGTTGAGTTCAAGGGCGAACCGAAGCGCTTTTCCCCGGAGGAGATCAGCTCGATGGTG 279922
Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615
| || ||||||||||| | || || || ||| | || |||| | || || || ||
Sbjct 279921 CTGGTCAAAATGAAGGAGACGGCCGAGGCTTATCTGGGCGAAAGCATCACAGACGCAGTC 279862
Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675
|| || || || ||||| || || || | ||||| || || || ||||||||| ||
Sbjct 279861 ATCACAGTGCCTGCCTACTTCAACGACTCACAGCGCCAGGCCACGAAGGATGCTGGCCGC 279802
Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735
|| || || | ||||| || ||||| | ||||| || || || || || | || |||
Sbjct 279801 ATCGCAGGCCTCAATGTGCTCAGAATCGTCAATGAGCCGACGGCGGCCGCGCTAGCCTAT 279742
Query 349736 GGGCTTGATAAAA---TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || || || | ||| | | || ||| | || || || || | || ||
Sbjct 279741 GGACTGGACAAGAATCTGAAGGGC---GAGCGCAATGTGCTCATCTTCGACCTGGGCGGC 279685
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCA 349849
|| || ||||| || || | || || | || |||||| | ||||| || ||
Sbjct 279684 GGAACCTTTGACGTGTCCATCCTGACCATCGACGAGGGATCCCTGTTTGAGGTGCGGGCC 279625
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
||||| || || || ||||| || || ||||| || || || || || || | || |
Sbjct 279624 ACTGCCGGAGACACCCATCTGGGCGGCGAAGACTTCGACAACCGACTGGTCACACACCTG 279565
Query 349910 GTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969
| | || ||||||||| || || | ||| | | || ||| | || ||||
Sbjct 279564 GCAGATGAGTTTAAGCGTAAATACAAGAAGGATCTGCGCACCAACCCTCGTGCTCTGCGA 279505
Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029
||||| |||| ||| || || || ||||| || | || || | || | | |
Sbjct 279504 CGCCTCCGAACGGCGGCCGAGCGGGCCAAGCGCACCCTCTCCTCCAGCACGGAGGCGACC 279445
Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089
||||| || ||| |||| || ||| | || | || | || | || || ||
Sbjct 279444 ATTGAGATAGATGCTCTGTTCGAGGGCCACGACTACTACACCAAGATGAGCCGCGCACGC 279385
Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149
|| || ||| | || || || || || ||| || | || ||||| || | |
Sbjct 279384 TTCGAGGAACTGTGCGCAGACCTCTTCAGGAACACATTGCAGCCGGTGGAGAAGGCCCTC 279325
Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209
|| ||||| || ||| ||| | ||||| |||| | || | || || || || ||
Sbjct 279324 AACGATGCCAAGATGGACAAGAGCCAGATCCATGACATCGTGCTCGTAGGCGGCTCCACG 279265
Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA-- 350267
|| ||||| ||||| || | || |||| || || || ||||| || || |
Sbjct 279264 CGCATTCCGAAAGTGCAGAGCCTCCTCCAACAGTTCTTCAACGG-AAAGAGCC-TCAACC 279207
Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316
|| || |||||||| || || || || || || |||||||| |||||
Sbjct 279206 TGTCCATCAATCCAGACGAGGCGGTGGCCTACGGGGCTGCTGTCCAGGC 279158
Score = 122 bits (134), Expect = 3e-22
Identities = 710/1129 (63%), Gaps = 22/1129 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| |||||||| || || || || || || || || | ||| | || | |
Sbjct 276272 GCTATTGGAATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTACCAGCACGGAAAG 276213
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || || || ||||| || || ||| | || ||||| || || ||||| ||
Sbjct 276212 GTGGAGATTATCGCCAATGACCAGGGAAACCGGACGACGCCCAGCTATGTGGCATTCACA 276153
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| | |||||| ||||||| || | || || || || | || || || | ||
Sbjct 276152 GAGTCGGAGCGTCTGATTGGCGACGCCGCCAAGAACCAGGTGGCAATGAACCCGATGAAC 276093
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAATCTACACAA 349435
|| ||||| ||||| ||||| || ||||| | |||| | | ||| | || |
Sbjct 276092 ACAGTTTTCGATGCCAAGCGCCTGATTGGGCGCAAGTACGACGATCCCAAGATTGCAGAG 276033
Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495
|| | || || | || || | || || || || || | || || | |||
Sbjct 276032 ---GACATCAAGCACTGGCCGTTCAAGGTGGT---AAGCGATGGGGGCAAGCCCAAGATT 275979
Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555
| ||||| | || || |||| || | |||| || | || || || |||||
Sbjct 275978 GGCGTTGAGTTCAAGGGCGAACCGAAGCGCTTTTCTCCGTAGGAGATCAGCTCGATGGTG 275919
Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615
| || ||||||||||| | || || || ||| | || |||| | || || || ||
Sbjct 275918 CTGGTCAAAATGAAGGAGACGGCCGAGGCTTATCTGGGCGAAAGCATCACAGACGCAGTC 275859
Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675
|| || || || ||||| || || || | ||||| || || || ||||||||| ||
Sbjct 275858 ATCACAGTGCCTGCCTACTTCAACGACTCACAGCGCCAGGCCACGAAGGATGCTGGCCGC 275799
Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735
|| || || | ||||| || ||||| | ||||| || || || || || | || |||
Sbjct 275798 ATCGCAGGCCTCAATGTGCTCAGAATCGTCAATGAGCCGACGGCGGCCGCGCTAGCCTAT 275739
Query 349736 GGGCTTGATAAAA---TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || || || | ||| | | || ||| | || || || || | || ||
Sbjct 275738 GGACTGGACAAGAATCTGAAGGGC---GAGCGCAATGTGCTCATCTTCGACCTGGGCGGC 275682
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCA 349849
|| || ||||| || || | || || | || |||||| | ||||| || ||
Sbjct 275681 GGAACCTTTGACGTGTCCATCCTGACCATCGACGAGGGATCCCTGTTTGAGGTGCGGGCC 275622
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
||||| || || || ||||| || || ||||| || || || || || || | || |
Sbjct 275621 ACTGCCGGAGACACCCATCTGGGCGGCGAAGACTTCGACAACCGACTGGTCACACACCTG 275562
Query 349910 GTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGT 349969
| | || ||||||||| || || | ||| | | || ||| | || ||||
Sbjct 275561 GCAGATGAGTTTAAGCGTAAATACAAGAAGGATCTGCGCACCAACCCTCGTGCTCTGCGA 275502
Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029
||||| |||| ||| || || || ||||| || | || || | || | | |
Sbjct 275501 CGCCTCCGAACGGCGGCCGAGCGGGCCAAGCGCACCCTCTCCTCCAGCACGGAGGCGACC 275442
Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089
||||| || ||| |||| || ||| | || | || | || | || || ||
Sbjct 275441 ATTGAGATAGATGCTCTGTTCGAGGGCCACGACTACTACACCAAGATGAGCCGCGCACGC 275382
Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149
|| || ||| | || || || || || ||| || | || ||||| || | |
Sbjct 275381 TTCGAGGAACTGTGCGCAGACCTCTTCAGGAACACATTGCAGCCGGTGGAGAAGGCCCTC 275322
Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209
|| ||||| || ||| ||| | ||||| |||| | || | || || || || ||
Sbjct 275321 AACGATGCCAAGATGGACAAGAGCCAGATCCATGACATCGTGCTCGTAGGCGGCTCCACG 275262
Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA-- 350267
|| ||||| ||||| || | || |||| || || || ||||| || || |
Sbjct 275261 CGCATTCCGAAAGTGCAGAGCCTCCTCCAACAGTTCTTCAACGG-AAAGAGCC-TCAACC 275204
Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316
|| || |||||||| || || || || || || |||||||| |||||
Sbjct 275203 TGTCCATCAATCCAGACGAGGCGGTGGCCTACGGGGCTGCTGTCCAGGC 275155
>seq224
Length=190040
Score = 116 bits (128), Expect = 1e-20
Identities = 231/341 (68%), Gaps = 6/341 (2%)
Strand=Plus/Minus
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612
||||| | ||| |||||||||| ||| || || || | ||||||| ||| || | ||
Sbjct 57840 GTTTTGGGTAAGATGAAGGAAACTGCCGAGGCTTACCTTGGTGAAAAAGTGACGCAGGCC 57781
Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672
|| |||||||| || || || ||||| |||||||||||| ||||| || ||||| ||
Sbjct 57780 GTCATTACTGTTCCGGCTTACTTTAACGATGCCCAGCGTCAGGCAACCAAGGATGCCGGT 57721
Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732
| ||||| || | | || || | || ||||| ||||| || ||||| || ||||
Sbjct 57720 CGTATTGCTGGCCTTGAAGTGCTGCGTATCATTAACGAACCAACCGCTGCTGCCCTTGCC 57661
Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
||||| | || || | || | | | | | || | ||| ||| | ||||||
Sbjct 57660 TATGGCATGGAAAAGAAAAGCGGC--GGCACA----GTTGCTGTTTATGACCTTGGTGGT 57607
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852
|| || || || || || | || | || || || | | ||||| ||| | ||
Sbjct 57606 GGCACGTTCGACGTTTCCGTTCTGGAAATTTCTGACGGCGTGATCGAAGTGAAATCCACA 57547
Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCG 349893
|||||||| |||||||| |||||||| ||||| ||
Sbjct 57546 AACGGTGATACGTTCCTTGGTGGTGAAGATTTCGATAACCG 57506
>seq8
Length=1553183
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612
||||| | ||| |||||||||| ||| || || || | ||||||| ||| || | ||
Sbjct 763546 GTTTTGGGTAAGATGAAGGAAACTGCCGAGGCTTACCTTGGTGAAAAAGTGACGCAGGCC 763487
Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672
|| |||||||| || || || ||||| |||||||||||| ||||| || ||||| ||
Sbjct 763486 GTCATTACTGTTCCGGCTTACTTTAACGATGCCCAGCGTCAGGCAACCAAGGATGCCGGT 763427
Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732
| ||||| || | | || || | || ||||| ||||| || ||||| || ||||
Sbjct 763426 CGTATTGCTGGCCTTGAAGTGCTGCGTATCATTAACGAACCAACCGCTGCTGCCCTTGCC 763367
Query 349733 TATGG 349737
|||||
Sbjct 763366 TATGG 763362
>seq1293
Length=3713
Score = 109 bits (120), Expect = 2e-18
Identities = 193/281 (69%), Gaps = 3/281 (1%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
||||| || || || | ||||| | | || |||||||||| ||||| || ||| |
Sbjct 2958 CCCGAGGAGATCTCTGCCATGGTCCTCGGCAAGATGAAGGAAACCGCTGAGGCTTATCTC 2899
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| | | || || | || || | || || || ||||| || || ||||||||||||
Sbjct 2898 GGCAAGAAGGTCACCCACGCCGTGGTCACAGTGCCGGCCTACTTCAACGATGCCCAGCGT 2839
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||||||| |||||| || | ||||| | | || || || |||
Sbjct 2838 CAAGCCACCAAGGATGCTGGCGTCATTGCCGGTCTCAATGTAATGCGCATCATCAACGAA 2779
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
|| ||||| || || ||||| || || || ||||| ||| || || || ||| |
Sbjct 2778 CCGACTGCCGCTGCCATTGCTTACGGCCTCGATAA---GAGGGAGGGCGAGAAGAATGTG 2722
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACT 349812
|| | || ||| | || || |||||||| ||||| || ||
Sbjct 2721 CTGGTGTTCGATCTGGGCGGCGGTACTTTCGATGTCTCCCT 2681
>seq32
Length=1341622
Score = 109 bits (120), Expect = 2e-18
Identities = 193/281 (69%), Gaps = 3/281 (1%)
Strand=Plus/Minus
Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591
||||| || || || | ||||| | | || |||||||||| ||||| || ||| |
Sbjct 768180 CCCGAGGAGATCTCTGCCATGGTCCTCGGCAAGATGAAGGAAACCGCTGAGGCTTATCTC 768121
Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651
|| | | || || | || || | || || || ||||| || || ||||||||||||
Sbjct 768120 GGCAAGAAGGTCACCCACGCCGTGGTCACAGTGCCGGCCTACTTCAACGATGCCCAGCGT 768061
Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711
|| || || ||||||||| |||||| || | ||||| | | || || || |||
Sbjct 768060 CAAGCCACCAAGGATGCTGGCGTCATTGCCGGTCTCAATGTAATGCGCATCATCAACGAA 768001
Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771
|| ||||| || || ||||| || || || ||||| ||| || || || ||| |
Sbjct 768000 CCGACTGCCGCTGCCATTGCTTACGGCCTCGATAA---GAGGGAGGGCGAGAAGAATGTG 767944
Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACT 349812
|| | || ||| | || || |||||||| ||||| || ||
Sbjct 767943 CTGGTGTTCGATCTGGGCGGCGGTACTTTCGATGTCTCCCT 767903
>seq154
Length=283319
Score = 86.0 bits (94), Expect = 2e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 239483 TTAAATCAATTCTTCCAGGACGAATTAATGCTGGATCTAAACTATCATAATTATTACTTG 239542
||||||||||||||||||| || ||||||||||||||||| | ||| ||| |||| |||
Sbjct 179413 TTAAATCAATTCTTCCAGGTCGTATTAATGCTGGATCTAAGCGATCTAAATAATTAGTTG 179472
Query 239543 TTATAATCATAATTCTA 239559
| |||| | |||||||
Sbjct 179473 TCATAAATACAATTCTA 179489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515216833528805
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |