Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq111 113 5e-20 >seq111 Length=362587 Score = 113 bits (124), Expect = 5e-20 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| | ||| | || || |||||| ||||||||||||||||||| ||| || Sbjct 244820 TTTGCCGAGCGTATTATTGCCTTTGCAGCCGTGGAAGGAATCTTCTTCAGCGGCAGCTTT 244761 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | || || ||||| || ||||||||||||||||| || |||| |||||||||||| Sbjct 244760 GCCTCGATCTTTTGGCTGAAGAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCAACGAG 244701 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTG 60134 ||||| || || ||||| || ||||| || ||||| ||| Sbjct 244700 CTGATCTCTCGTGACGAAGGTCTCCACTGCGACTTTGCGGTG 244659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548511532556400