Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq300 145 3e-30 seq73 96.9 1e-15 seq26 96.9 1e-15 seq15 96.9 1e-15 seq8 96.9 1e-15 seq350 93.3 2e-14 >seq300 Length=136790 Score = 145 bits (160), Expect = 3e-30 Identities = 294/431 (68%), Gaps = 18/431 (4%) Strand=Plus/Plus Query 2586 CGTCGATTGTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTCCACTTCTGCACGGTTT 2645 || |||||||| ||||||| ||||| | |||||||||||||| || || | | |||| Sbjct 45637 CGCCGATTGTTGAACCAGTCGACCCATTTAAGTGTGGCCAGTTCAACCGCTTCCCTGTTT 45696 Query 2646 TTCCAG---CTCTTACGGTGTATTACCTCCGCTTTGTAAAGACCATTGATGCTCTCAGCC 2702 ||||| | || || | || | || | |||||| || || || ||| |||| || Sbjct 45697 TTCCATGGCCCCTGCCGATAGATGAGTTCGGTTTTGTAGAGCCCGTTAATGGTCTCCGCG 45756 Query 2703 ATCGCGTTGTCATACGAGTCGCCTGTACTCCCTGTTGATGCCAGTAATCCGGCTTCTTTT 2762 | || || ||||| || || || || || ||| || | | || ||||| Sbjct 45757 AGGGCATTATCATAGGAATCTCCAACGCTTCCGACTGAGGCAACGAGCCCCGCTTCAGCC 45816 Query 2763 AGTCGCTCCGTATAGGCCAGTGACACATACTGAGAGCCTTTATCGCTGTGATGGATGG-- 2820 |||| | ||| ||| | |||||||||||| |||| ||| |||||| | Sbjct 45817 AGTCTTTGCGTGTAGCGAATGGACACATACTGACAGCCGCGATCTGAATGATGGGTCACT 45876 Query 2821 --TGCCAGACGGA-CGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCG 2877 | || | | | | ||| || ||| |||||| || |||||||||||||| |||| Sbjct 45877 TTTCCCTCAGGTTGCCTCTGGCACAGAAC--CTGCTCAAGGGCATCCAGCACGAA-GTCG 45933 Query 2878 TTTCCATAGAC----GATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATCAATG 2933 | || | | |||||||| ||||| ||||| ||| | |||||||||||||||| Sbjct 45934 GT---ATGGGCCGTTGATGAGACACGCCAGCCCACAATGACCCGGGCAAACACATCAATG 45990 Query 2934 ATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCACCCAC 2993 || || || ||||| || |||||| |||| ||| || ||||||||||| | ||||| Sbjct 45991 ATGAAGGCTACATAAACAAAGCCCAGCCAAGTGGAAACATAAGTAAAATCCGAAACCCAG 46050 Query 2994 AGCTGGTCAGG 3004 ||| || ||| Sbjct 46051 AGCCTGTTAGG 46061 Score = 84.2 bits (92), Expect = 9e-12 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 76092 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCC 76151 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||| |||||||| | ||| | ||| || Sbjct 76152 ACGATCCTGCGGGCGAACACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTC 76211 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || ||||| || | ||||| ||||||| | || ||| |||||| ||| Sbjct 76212 TGGACATAGGTAAAGTCCGAGACCCAGAGCTGGTTGGAGAACTCGGCCCGGAACTGCCGG 76271 Query 3027 TTTACGCGGTC 3037 || || | ||| Sbjct 76272 TTGACCCTGTC 76282 >seq73 Length=471550 Score = 96.9 bits (106), Expect = 1e-15 Identities = 416/648 (64%), Gaps = 15/648 (2%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 266304 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCC 266363 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||||||||||||| | ||| | ||| || Sbjct 266364 ACGATCCTGCGGGCGAACACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTC 266423 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || || || || | ||||| ||||||| || || ||| |||||| ||| Sbjct 266424 TGGACATAGGTGAAGTCCGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGG 266483 Query 3027 TTTACGCGGTCGCCTGCGGCAACGGC------TTTCCGGCTGATGGTCGTACGGACCTTT 3080 || || | ||| | | | || ||| | ||||| | |||||| |||||| Sbjct 266484 TTGACCCTGTCATC-GGGACAGGGGCGCGCCGTATCCGGACG--GGTCGTGATGACCTTC 266540 Query 3081 TTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTG 3140 ||||||| ||||| || ||||| ||| || || | || || || | Sbjct 266541 CGGCCCCGGATGACACCCTTCAGACCCATCTTGCGCATCAGGCGCTCAACAGTGCAGCGT 266600 Query 3141 GCCACCCTGATTCCTTCCCGTAACA-ACTGACGCCAGACTTTACGCACACCGTACACCTG 3199 || ||| || || || || ||| |||| || || ||| |||| || || Sbjct 266601 GCAACCTGTCGCCCCTCACGCTGCAGGCTG-TGCCACACCTTGCGCGCACCATAAACAGC 266659 Query 3200 ATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCGCACG 3259 | |||| || | | | || | || | | | |||| ||| || ||||||| Sbjct 266660 ACGATTATCCTGCCAGATCCGGCGGATATGTTCCATCAGTTCCCTATCGCGCCGCGCACG 266719 Query 3260 GGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGAC-AATGGTAATACGTTGACGGGG 3318 | ||| || ||||| | | ||| | || | | |||||| |||| ||||||| Sbjct 266720 CGGTCTGGCCCTAGTCGGAT-CTCTTGCTATGGCCGCCTGCTGGTAAAACGTGGACGGGG 266778 Query 3319 CAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCAC-GCAGCTTATCCAGC 3377 |||| |||| ||| || | || |||||||||| | ||| |||| | || | Sbjct 266779 CAATCGGCAGAACGCGACAGATTGGCTCGACCCCGTAATCGGCACGGCAGGCT-TCAATA 266837 Query 3378 AGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCT 3437 | | ||||||| | ||||||||| |||||||| ||||||||||| || |||| Sbjct 266838 AACGCGATCATTTGCGAAACGGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCT 266897 Query 3438 GGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCA 3485 ||||| || || | |||||||||||| ||| || |||| Sbjct 266898 TCTTGAGGATCTCATTGGCCTGACGCAGTTCACGAACTTCCCGCTCCA 266945 >seq26 Length=998041 Score = 96.9 bits (106), Expect = 1e-15 Identities = 416/648 (64%), Gaps = 15/648 (2%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 434564 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCC 434623 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||||||||||||| | ||| | ||| || Sbjct 434624 ACGATCCTGCGGGCGAACACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTC 434683 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || || || || | ||||| ||||||| || || ||| |||||| ||| Sbjct 434684 TGGACATAGGTGAAGTCCGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGG 434743 Query 3027 TTTACGCGGTCGCCTGCGGCAACGGC------TTTCCGGCTGATGGTCGTACGGACCTTT 3080 || || | ||| | | | || ||| | ||||| | |||||| |||||| Sbjct 434744 TTGACCCTGTCATC-GGGACAGGGGCGCGCCGTATCCGGACG--GGTCGTGATGACCTTC 434800 Query 3081 TTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTG 3140 ||||||| ||||| || ||||| ||| || || | || || || | Sbjct 434801 CGGCCCCGGATGACACCCTTCAGACCCATCTTGCGCATCAGGCGCTCAACAGTGCAGCGT 434860 Query 3141 GCCACCCTGATTCCTTCCCGTAACA-ACTGACGCCAGACTTTACGCACACCGTACACCTG 3199 || ||| || || || || ||| |||| || || ||| |||| || || Sbjct 434861 GCAACCTGTCGCCCCTCACGCTGCAGGCTG-TGCCACACCTTGCGCGCACCATAAACAGC 434919 Query 3200 ATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCGCACG 3259 | |||| || | | | || | || | | | |||| ||| || ||||||| Sbjct 434920 ACGATTATCCTGCCAGATCCGGCGGATATGTTCCATCAGTTCCCTATCGCGCCGCGCACG 434979 Query 3260 GGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGAC-AATGGTAATACGTTGACGGGG 3318 | ||| || ||||| | | ||| | || | | |||||| |||| ||||||| Sbjct 434980 CGGTCTGGCCCTAGTCGGAT-CTCTTGCTATGGCCGCCTGCTGGTAAAACGTGGACGGGG 435038 Query 3319 CAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCAC-GCAGCTTATCCAGC 3377 |||| |||| ||| || | || |||||||||| | ||| |||| | || | Sbjct 435039 CAATCGGCAGAACGCGACAGATTGGCTCGACCCCGTAATCGGCACGGCAGGCT-TCAATA 435097 Query 3378 AGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCT 3437 | | ||||||| | ||||||||| |||||||| ||||||||||| || |||| Sbjct 435098 AACGCGATCATTTGCGAAACGGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCT 435157 Query 3438 GGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCA 3485 ||||| || || | |||||||||||| ||| || |||| Sbjct 435158 TCTTGAGGATCTCATTGGCCTGACGCAGTTCACGAACTTCCCGCTCCA 435205 Score = 93.3 bits (102), Expect = 2e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 174437 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCC 174496 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||| |||||||| | ||| | ||| || Sbjct 174497 ACGATCCTGCGGGCGAACACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTC 174556 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || ||||| || | ||||| ||||||| || | || ||| |||||| ||| Sbjct 174557 TGGACATAGGTAAAGTCCGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGG 174616 Query 3027 TTTACGCGGTC 3037 || || | ||| Sbjct 174617 TTGACCCTGTC 174627 >seq15 Length=1383265 Score = 96.9 bits (106), Expect = 1e-15 Identities = 416/648 (64%), Gaps = 15/648 (2%) Strand=Plus/Minus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 659284 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCC 659225 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||||||||||||| | ||| | ||| || Sbjct 659224 ACGATCCTGCGGGCGAACACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTC 659165 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || || || || | ||||| ||||||| || || ||| |||||| ||| Sbjct 659164 TGGACATAGGTGAAGTCCGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGG 659105 Query 3027 TTTACGCGGTCGCCTGCGGCAACGGC------TTTCCGGCTGATGGTCGTACGGACCTTT 3080 || || | ||| | | | || ||| | ||||| | |||||| |||||| Sbjct 659104 TTGACCCTGTCATC-GGGACAGGGGCGCGCCGTATCCGGACG--GGTCGTGATGACCTTC 659048 Query 3081 TTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTG 3140 ||||||| ||||| || ||||| ||| || || | || || || | Sbjct 659047 CGGCCCCGGATGACACCCTTCAGACCCATCTTGCGCATCAGGCGCTCAACAGTGCAGCGT 658988 Query 3141 GCCACCCTGATTCCTTCCCGTAACA-ACTGACGCCAGACTTTACGCACACCGTACACCTG 3199 || ||| || || || || ||| |||| || || ||| |||| || || Sbjct 658987 GCAACCTGTCGCCCCTCACGCTGCAGGCTG-TGCCACACCTTGCGCGCACCATAAACAGC 658929 Query 3200 ATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCGCACG 3259 | |||| || | | | || | || | | | |||| ||| || ||||||| Sbjct 658928 ACGATTATCCTGCCAGATCCGGCGGATATGTTCCATCAGTTCCCTATCGCGCCGCGCACG 658869 Query 3260 GGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGAC-AATGGTAATACGTTGACGGGG 3318 | ||| || ||||| | | ||| | || | | |||||| |||| ||||||| Sbjct 658868 CGGTCTGGCCCTAGTCGGAT-CTCTTGCTATGGCCGCCTGCTGGTAAAACGTGGACGGGG 658810 Query 3319 CAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCAC-GCAGCTTATCCAGC 3377 |||| |||| ||| || | || |||||||||| | ||| |||| | || | Sbjct 658809 CAATCGGCAGAACGCGACAGATTGGCTCGACCCCGTAATCGGCACGGCAGGCT-TCAATA 658751 Query 3378 AGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCT 3437 | | ||||||| | ||||||||| |||||||| ||||||||||| || |||| Sbjct 658750 AACGCGATCATTTGCGAAACGGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCT 658691 Query 3438 GGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCA 3485 ||||| || || | |||||||||||| ||| || |||| Sbjct 658690 TCTTGAGGATCTCATTGGCCTGACGCAGTTCACGAACTTCCCGCTCCA 658643 Score = 93.3 bits (102), Expect = 2e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 1072729 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCC 1072788 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||| |||||||| | ||| | ||| || Sbjct 1072789 ACGATCCTGCGGGCGAACACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTC 1072848 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || ||||| || | ||||| ||||||| || | || ||| |||||| ||| Sbjct 1072849 TGGACATAGGTAAAGTCCGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGG 1072908 Query 3027 TTTACGCGGTC 3037 || || | ||| Sbjct 1072909 TTGACCCTGTC 1072919 Score = 93.3 bits (102), Expect = 2e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 1093961 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCC 1093902 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||| |||||||| | ||| | ||| || Sbjct 1093901 ACGATCCTGCGGGCGAACACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTC 1093842 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || ||||| || | ||||| ||||||| || | || ||| |||||| ||| Sbjct 1093841 TGGACATAGGTAAAGTCCGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGG 1093782 Query 3027 TTTACGCGGTC 3037 || || | ||| Sbjct 1093781 TTGACCCTGTC 1093771 >seq8 Length=1553183 Score = 96.9 bits (106), Expect = 1e-15 Identities = 416/648 (64%), Gaps = 15/648 (2%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 280655 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCC 280714 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||||||||||||| | ||| | ||| || Sbjct 280715 ACGATCCTGCGGGCGAACACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTC 280774 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || || || || | ||||| ||||||| || || ||| |||||| ||| Sbjct 280775 TGGACATAGGTGAAGTCCGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGG 280834 Query 3027 TTTACGCGGTCGCCTGCGGCAACGGC------TTTCCGGCTGATGGTCGTACGGACCTTT 3080 || || | ||| | | | || ||| | ||||| | |||||| |||||| Sbjct 280835 TTGACCCTGTCATC-GGGACAGGGGCGCGCCGTATCCGGACG--GGTCGTGATGACCTTC 280891 Query 3081 TTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTG 3140 ||||||| ||||| || ||||| ||| || || | || || || | Sbjct 280892 CGGCCCCGGATGACACCCTTCAGACCCATCTTGCGCATCAGGCGCTCAACAGTGCAGCGT 280951 Query 3141 GCCACCCTGATTCCTTCCCGTAACA-ACTGACGCCAGACTTTACGCACACCGTACACCTG 3199 || ||| || || || || ||| |||| || || ||| |||| || || Sbjct 280952 GCAACCTGTCGCCCCTCACGCTGCAGGCTG-TGCCACACCTTGCGCGCACCATAAACAGC 281010 Query 3200 ATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCGCACG 3259 | |||| || | | | || | || | | | |||| ||| || ||||||| Sbjct 281011 ACGATTATCCTGCCAGATCCGGCGGATATGTTCCATCAGTTCCCTATCGCGCCGCGCACG 281070 Query 3260 GGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGAC-AATGGTAATACGTTGACGGGG 3318 | ||| || ||||| | | ||| | || | | |||||| |||| ||||||| Sbjct 281071 CGGTCTGGCCCTAGTCGGAT-CTCTTGCTATGGCCGCCTGCTGGTAAAACGTGGACGGGG 281129 Query 3319 CAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCAC-GCAGCTTATCCAGC 3377 |||| |||| ||| || | || |||||||||| | ||| |||| | || | Sbjct 281130 CAATCGGCAGAACGCGACAGATTGGCTCGACCCCGTAATCGGCACGGCAGGCT-TCAATA 281188 Query 3378 AGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCT 3437 | | ||||||| | ||||||||| |||||||| ||||||||||| || |||| Sbjct 281189 AACGCGATCATTTGCGAAACGGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCT 281248 Query 3438 GGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCA 3485 ||||| || || | |||||||||||| ||| || |||| Sbjct 281249 TCTTGAGGATCTCATTGGCCTGACGCAGTTCACGAACTTCCCGCTCCA 281296 Score = 96.9 bits (106), Expect = 1e-15 Identities = 416/648 (64%), Gaps = 15/648 (2%) Strand=Plus/Minus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 296625 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCC 296566 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||||||||||||| | ||| | ||| || Sbjct 296565 ACGATCCTGCGGGCGAACACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTC 296506 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || || || || | ||||| ||||||| || || ||| |||||| ||| Sbjct 296505 TGGACATAGGTGAAGTCCGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGG 296446 Query 3027 TTTACGCGGTCGCCTGCGGCAACGGC------TTTCCGGCTGATGGTCGTACGGACCTTT 3080 || || | ||| | | | || ||| | ||||| | |||||| |||||| Sbjct 296445 TTGACCCTGTCATC-GGGACAGGGGCGCGCCGTATCCGGACG--GGTCGTGATGACCTTC 296389 Query 3081 TTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTG 3140 ||||||| ||||| || ||||| ||| || || | || || || | Sbjct 296388 CGGCCCCGGATGACACCCTTCAGACCCATCTTGCGCATCAGGCGCTCAACAGTGCAGCGT 296329 Query 3141 GCCACCCTGATTCCTTCCCGTAACA-ACTGACGCCAGACTTTACGCACACCGTACACCTG 3199 || ||| || || || || ||| |||| || || ||| |||| || || Sbjct 296328 GCAACCTGTCGCCCCTCACGCTGCAGGCTG-TGCCACACCTTGCGCGCACCATAAACAGC 296270 Query 3200 ATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCGCACG 3259 | |||| || | | | || | || | | | |||| ||| || ||||||| Sbjct 296269 ACGATTATCCTGCCAGATCCGGCGGATATGTTCCATCAGTTCCCTATCGCGCCGCGCACG 296210 Query 3260 GGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGAC-AATGGTAATACGTTGACGGGG 3318 | ||| || ||||| | | ||| | || | | |||||| |||| ||||||| Sbjct 296209 CGGTCTGGCCCTAGTCGGAT-CTCTTGCTATGGCCGCCTGCTGGTAAAACGTGGACGGGG 296151 Query 3319 CAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCAC-GCAGCTTATCCAGC 3377 |||| |||| ||| || | || |||||||||| | ||| |||| | || | Sbjct 296150 CAATCGGCAGAACGCGACAGATTGGCTCGACCCCGTAATCGGCACGGCAGGCT-TCAATA 296092 Query 3378 AGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCT 3437 | | ||||||| | ||||||||| |||||||| ||||||||||| || |||| Sbjct 296091 AACGCGATCATTTGCGAAACGGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCT 296032 Query 3438 GGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCA 3485 ||||| || || | |||||||||||| ||| || |||| Sbjct 296031 TCTTGAGGATCTCATTGGCCTGACGCAGTTCACGAACTTCCCGCTCCA 295984 Score = 96.9 bits (106), Expect = 1e-15 Identities = 416/648 (64%), Gaps = 15/648 (2%) Strand=Plus/Minus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 375227 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCC 375168 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||||||||||||| | ||| | ||| || Sbjct 375167 ACGATCCTGCGGGCGAACACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTC 375108 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || || || || | ||||| ||||||| || || ||| |||||| ||| Sbjct 375107 TGGACATAGGTGAAGTCCGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGG 375048 Query 3027 TTTACGCGGTCGCCTGCGGCAACGGC------TTTCCGGCTGATGGTCGTACGGACCTTT 3080 || || | ||| | | | || ||| | ||||| | |||||| |||||| Sbjct 375047 TTGACCCTGTCATC-GGGACAGGGGCGCGCCGTATCCGGACG--GGTCGTGATGACCTTC 374991 Query 3081 TTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTG 3140 ||||||| ||||| || ||||| ||| || || | || || || | Sbjct 374990 CGGCCCCGGATGACACCCTTCAGACCCATCTTGCGCATCAGGCGCTCAACAGTGCAGCGT 374931 Query 3141 GCCACCCTGATTCCTTCCCGTAACA-ACTGACGCCAGACTTTACGCACACCGTACACCTG 3199 || ||| || || || || ||| |||| || || ||| |||| || || Sbjct 374930 GCAACCTGTCGCCCCTCACGCTGCAGGCTG-TGCCACACCTTGCGCGCACCATAAACAGC 374872 Query 3200 ATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCGCACG 3259 | |||| || | | | || | || | | | |||| ||| || ||||||| Sbjct 374871 ACGATTATCCTGCCAGATCCGGCGGATATGTTCCATCAGTTCCCTATCGCGCCGCGCACG 374812 Query 3260 GGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGAC-AATGGTAATACGTTGACGGGG 3318 | ||| || ||||| | | ||| | || | | |||||| |||| ||||||| Sbjct 374811 CGGTCTGGCCCTAGTCGGAT-CTCTTGCTATGGCCGCCTGCTGGTAAAACGTGGACGGGG 374753 Query 3319 CAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCAC-GCAGCTTATCCAGC 3377 |||| |||| ||| || | || |||||||||| | ||| |||| | || | Sbjct 374752 CAATCGGCAGAACGCGACAGATTGGCTCGACCCCGTAATCGGCACGGCAGGCT-TCAATA 374694 Query 3378 AGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCT 3437 | | ||||||| | ||||||||| |||||||| ||||||||||| || |||| Sbjct 374693 AACGCGATCATTTGCGAAACGGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCT 374634 Query 3438 GGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCA 3485 ||||| || || | |||||||||||| ||| || |||| Sbjct 374633 TCTTGAGGATCTCATTGGCCTGACGCAGTTCACGAACTTCCCGCTCCA 374586 Score = 96.9 bits (106), Expect = 1e-15 Identities = 416/648 (64%), Gaps = 15/648 (2%) Strand=Plus/Minus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 415498 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCC 415439 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||||||||||||| | ||| | ||| || Sbjct 415438 ACGATCCTGCGGGCGAACACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTC 415379 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || || || || | ||||| ||||||| || || ||| |||||| ||| Sbjct 415378 TGGACATAGGTGAAGTCCGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGG 415319 Query 3027 TTTACGCGGTCGCCTGCGGCAACGGC------TTTCCGGCTGATGGTCGTACGGACCTTT 3080 || || | ||| | | | || ||| | ||||| | |||||| |||||| Sbjct 415318 TTGACCCTGTCATC-GGGACAGGGGCGCGCCGTATCCGGACG--GGTCGTGATGACCTTC 415262 Query 3081 TTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTG 3140 ||||||| ||||| || ||||| ||| || || | || || || | Sbjct 415261 CGGCCCCGGATGACACCCTTCAGACCCATCTTGCGCATCAGGCGCTCAACAGTGCAGCGT 415202 Query 3141 GCCACCCTGATTCCTTCCCGTAACA-ACTGACGCCAGACTTTACGCACACCGTACACCTG 3199 || ||| || || || || ||| |||| || || ||| |||| || || Sbjct 415201 GCAACCTGTCGCCCCTCACGCTGCAGGCTG-TGCCACACCTTGCGCGCACCATAAACAGC 415143 Query 3200 ATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCGCACG 3259 | |||| || | | | || | || | | | |||| ||| || ||||||| Sbjct 415142 ACGATTATCCTGCCAGATCCGGCGGATATGTTCCATCAGTTCCCTATCGCGCCGCGCACG 415083 Query 3260 GGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGAC-AATGGTAATACGTTGACGGGG 3318 | ||| || ||||| | | ||| | || | | |||||| |||| ||||||| Sbjct 415082 CGGTCTGGCCCTAGTCGGAT-CTCTTGCTATGGCCGCCTGCTGGTAAAACGTGGACGGGG 415024 Query 3319 CAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCAC-GCAGCTTATCCAGC 3377 |||| |||| ||| || | || |||||||||| | ||| |||| | || | Sbjct 415023 CAATCGGCAGAACGCGACAGATTGGCTCGACCCCGTAATCGGCACGGCAGGCT-TCAATA 414965 Query 3378 AGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCT 3437 | | ||||||| | ||||||||| |||||||| ||||||||||| || |||| Sbjct 414964 AACGCGATCATTTGCGAAACGGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCT 414905 Query 3438 GGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCA 3485 ||||| || || | |||||||||||| ||| || |||| Sbjct 414904 TCTTGAGGATCTCATTGGCCTGACGCAGTTCACGAACTTCCCGCTCCA 414857 Score = 96.9 bits (106), Expect = 1e-15 Identities = 416/648 (64%), Gaps = 15/648 (2%) Strand=Plus/Minus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 480119 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCC 480060 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||||||||||||| | ||| | ||| || Sbjct 480059 ACGATCCTGCGGGCGAACACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTC 480000 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || || || || | ||||| ||||||| || || ||| |||||| ||| Sbjct 479999 TGGACATAGGTGAAGTCCGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGG 479940 Query 3027 TTTACGCGGTCGCCTGCGGCAACGGC------TTTCCGGCTGATGGTCGTACGGACCTTT 3080 || || | ||| | | | || ||| | ||||| | |||||| |||||| Sbjct 479939 TTGACCCTGTCATC-GGGACAGGGGCGCGCCGTATCCGGACG--GGTCGTGATGACCTTC 479883 Query 3081 TTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTG 3140 ||||||| ||||| || ||||| ||| || || | || || || | Sbjct 479882 CGGCCCCGGATGACACCCTTCAGACCCATCTTGCGCATCAGGCGCTCAACAGTGCAGCGT 479823 Query 3141 GCCACCCTGATTCCTTCCCGTAACA-ACTGACGCCAGACTTTACGCACACCGTACACCTG 3199 || ||| || || || || ||| |||| || || ||| |||| || || Sbjct 479822 GCAACCTGTCGCCCCTCACGCTGCAGGCTG-TGCCACACCTTGCGCGCACCATAAACAGC 479764 Query 3200 ATGATTTTCATCGTATACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGCTGCGCACG 3259 | |||| || | | | || | || | | | |||| ||| || ||||||| Sbjct 479763 ACGATTATCCTGCCAGATCCGGCGGATATGTTCCATCAGTTCCCTATCGCGCCGCGCACG 479704 Query 3260 GGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGAC-AATGGTAATACGTTGACGGGG 3318 | ||| || ||||| | | ||| | || | | |||||| |||| ||||||| Sbjct 479703 CGGTCTGGCCCTAGTCGGAT-CTCTTGCTATGGCCGCCTGCTGGTAAAACGTGGACGGGG 479645 Query 3319 CAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCAC-GCAGCTTATCCAGC 3377 |||| |||| ||| || | || |||||||||| | ||| |||| | || | Sbjct 479644 CAATCGGCAGAACGCGACAGATTGGCTCGACCCCGTAATCGGCACGGCAGGCT-TCAATA 479586 Query 3378 AGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCT 3437 | | ||||||| | ||||||||| |||||||| ||||||||||| || |||| Sbjct 479585 AACGCGATCATTTGCGAAACGGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCT 479526 Query 3438 GGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCA 3485 ||||| || || | |||||||||||| ||| || |||| Sbjct 479525 TCTTGAGGATCTCATTGGCCTGACGCAGTTCACGAACTTCCCGCTCCA 479478 Score = 93.3 bits (102), Expect = 2e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 885349 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCC 885290 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||| |||||||| | ||| | ||| || Sbjct 885289 ACGATCCTGCGGGCGAACACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTC 885230 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || ||||| || | ||||| ||||||| || | || ||| |||||| ||| Sbjct 885229 TGGACATAGGTAAAGTCCGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGG 885170 Query 3027 TTTACGCGGTC 3037 || || | ||| Sbjct 885169 TTGACCCTGTC 885159 >seq350 Length=115716 Score = 93.3 bits (102), Expect = 2e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 2847 GCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGACGATGAGACCCGCCACCCC 2906 ||||| || || || || |||||||| || ||| || | ||||| ||| ||| Sbjct 51922 GCCTGTTCAAGGGCGTCGAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCC 51981 Query 2907 ACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTG 2966 ||||| | ||| ||||||||||||| ||||| |||||||| | ||| | ||| || Sbjct 51982 ACGATCCTGCGGGCGAACACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTC 52041 Query 2967 CTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGG 3026 ||| || ||||| || | ||||| ||||||| || | || ||| |||||| ||| Sbjct 52042 TGGACATAGGTAAAGTCCGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGG 52101 Query 3027 TTTACGCGGTC 3037 || || | ||| Sbjct 52102 TTGACCCTGTC 52112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203291205708550