Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_028677.1 Length=46596 Score E Sequences producing significant alignments: (Bits) Value seq22 80.6 8e-11 seq8 80.6 8e-11 >seq22 Length=1073832 Score = 80.6 bits (88), Expect = 8e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1708 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 1767 ||||||||||||| ||||| |||||||||||| |||| ||||| ||||||||| ||||| Sbjct 733063 GTAGCTCAATTGGCTAGAGTGCCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGACCCTC 733122 Query 1768 CGGGCCTGC 1776 | ||||| Sbjct 733123 CACCCCTGC 733131 >seq8 Length=1553183 Score = 80.6 bits (88), Expect = 8e-11 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1708 GTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 1767 ||||||||||||| ||||| |||||||||||| |||| ||||| ||||||||| ||||| Sbjct 1246418 GTAGCTCAATTGGCTAGAGTGCCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGACCCTC 1246359 Query 1768 CGGGCCTGC 1776 | ||||| Sbjct 1246358 CACCCCTGC 1246350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148982176590260