Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq22 91.5 4e-14 seq8 91.5 4e-14 >seq22 Length=1073832 Score = 91.5 bits (100), Expect = 4e-14 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 31254 TGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCG 31313 |||||| | ||| ||||||||||||| || ||| ||||||||||||||| |||||||||| Sbjct 952121 TGGCTGGGGCGGGAGGATTCGAACCTCCGCATGGCGGAATCAAAATCCGCTGCCTTACCG 952180 Query 31314 CTTGGCGACG 31323 |||||| ||| Sbjct 952181 CTTGGCTACG 952190 >seq8 Length=1553183 Score = 91.5 bits (100), Expect = 4e-14 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 31254 TGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTACCG 31313 |||||| | ||| ||||||||||||| || ||| ||||||||||||||| |||||||||| Sbjct 1000611 TGGCTGGGGCGGGAGGATTCGAACCTCCGCATGGCGGAATCAAAATCCGCTGCCTTACCG 1000552 Query 31314 CTTGGCGACG 31323 |||||| ||| Sbjct 1000551 CTTGGCTACG 1000542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138195224459890