Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_028950.1 Length=223932 Score E Sequences producing significant alignments: (Bits) Value seq15 84.2 3e-11 >seq15 Length=1383265 Score = 84.2 bits (92), Expect = 3e-11 Identities = 166/243 (68%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 99227 GGAACCACATCGCCAGCACGACGAACGATCACCTTATCGCCAATTCGCAGACCTTTGCGA 99286 |||| || ||||| || || ||| |||| ||||||| || | | ||||| Sbjct 695207 GGAATAACGTCGCCCGCCCGCTGAATCTGCACCGTATCGCCTGGGCGTACGTCCTTGCGG 695148 Query 99287 TGGATTTCATCTTCGTTATGCAGTGTTGCGTTGGA-AACCCACACACCGCCCACGAAAAC 99345 ||||| ||||||||||||| || || | | | ||| |||||| || || || Sbjct 695147 GCTATTTCGTCTTCGTTATGCA-TGGTGGCTCGCATTACCAGCACACCACCAACATTGAC 695089 Query 99346 GGGCTTCAGGCGCCCCACGGGGGTGATGGCTCCCGTTCTACCTACTTGAACTTCAATCGC 99405 ||| | ||| | | || ||||| | |||||||| | || || |||| |||||| || Sbjct 695088 GGGTTCCAGATGTGCAACAGGGGTCAGCGCTCCCGTGCGTCCAACCTGAATTTCAATGGC 695029 Query 99406 CTCTAGCGTCGTTACAGCCTCTTCTGCAGGGAACTTCCACGCGATAGCAAAACGAGGGGC 99465 | || || ||||| |||| |||||| ||||| ||||| || | || | || ||||| Sbjct 695028 TTTGAGGGTTGTTACGGCCTGTTCTGCCGGGAATTTCCAGGCAACGGCCCAGCGTGGGGC 694969 Query 99466 GCG 99468 ||| Sbjct 694968 GCG 694966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716437070759200