Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1090 145 2e-29
seq6 145 2e-29
seq23 134 3e-26
seq49 127 5e-24
seq35 123 6e-23
seq234 107 5e-18
seq300 100 7e-16
seq73 100 7e-16
seq22 100 7e-16
seq15 100 7e-16
seq8 100 7e-16
seq1207 84.2 5e-11
>seq1090
Length=6716
Score = 145 bits (160), Expect = 2e-29
Identities = 133/168 (79%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| |||| ||||| ||| | || || ||||| ||| |||| ||||| ||| | |||||
Sbjct 1295 CCAAATTTATAACGTGATTGTAACAGCCCATGCATTTATTATAATTTTTTTTATAGTTAT 1354
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || || || |||||||||||||| || |||||||| | || || |||||
Sbjct 1355 ACCTATTATAATTGGAGGATTCGGAAATTGATTAGTCCCTTTAATATTAGGAGCCCCTGA 1414
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718
||| ||||||||| || | || |||||||| ||||||||||| || ||
Sbjct 1415 TATAGCTTTTCCACGGATGAATAATATAAGATTTTGATTACTTCCTCC 1462
>seq6
Length=3104374
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || || |||| ||||| |||| || ||| | |||||
Sbjct 2898465 AGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCC 2898406
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || || || || ||||| || ||||||||
Sbjct 2898405 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 2898346
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| |||| || || || || ||||| |||
Sbjct 2898345 TGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTC 2898286
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || | |||||| | || | |||||||||
Sbjct 2898285 TTGCCAGTGAGAGTTTTCACAAAAATTTGCATTTT 2898251
>seq23
Length=1278451
Score = 134 bits (148), Expect = 3e-26
Identities = 164/224 (73%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || | ||||||||||| || || |||| ||||| || | | |||
Sbjct 1264097 CGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTA 1264156
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || |||||||| || |||||||| || || || ||||| || || || ||
Sbjct 1264157 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCC 1264216
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| |||||| || |||||||| || | || || || ||
Sbjct 1264217 TCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAACCTCCAAG 1264276
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || ||||| ||||| ||||| | || | ||||||||
Sbjct 1264277 GTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATTTT 1264320
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || | ||||||||||| || || |||| ||||| || | | |||
Sbjct 1263413 CGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTA 1263472
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || |||||||| || |||||||| || || || ||||| || || || ||
Sbjct 1263473 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCC 1263532
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| |||||| || |||||||| || | || || || |
Sbjct 1263533 TCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAACCTCCAGG 1263592
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| || ||||| |||| ||| ||
Sbjct 1263593 GTGATGGTTTTGCCGGTCAGAGTCTT 1263618
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || | ||||||||||| || || |||| ||||| || | | |||
Sbjct 1263641 CGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTA 1263700
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || |||||||| || |||||||| || || || ||||| || || || ||
Sbjct 1263701 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCC 1263760
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| |||||| || |||||||| || | || || || |
Sbjct 1263761 TCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAACCTCCAGG 1263820
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| || ||||| |||| ||| ||
Sbjct 1263821 GTGATGGTTTTGCCGGTCAGAGTCTT 1263846
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || | ||||||||||| || || |||| ||||| || | | |||
Sbjct 1263869 CGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTA 1263928
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || |||||||| || |||||||| || || || ||||| || || || ||
Sbjct 1263929 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCC 1263988
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| |||||| || |||||||| || | || || || |
Sbjct 1263989 TCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAACCTCCAGG 1264048
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| || ||||| |||| ||| ||
Sbjct 1264049 GTGATGGTTTTGCCGGTCAGAGTCTT 1264074
>seq49
Length=688652
Score = 127 bits (140), Expect = 5e-24
Identities = 129/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| |||| ||||| ||| |||| || ||||| ||| |||| ||||| ||| | || ||
Sbjct 6980 CCAAATTTATAACGTAATTGTTACAGCTCATGCGTTTATTATAATTTTTTTTATAGTAAT 7039
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| | || || || ||||| || |||||||| ||||||||||| | || || |||||
Sbjct 7040 ACCTATCATAATTGGAGGTTTTGGTAATTGATTAGTTCCTTTAATATTAGGAGCACCTGA 7099
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718
||| ||||| ||| | | || |||||||| |||||| | ||||| ||
Sbjct 7100 TATAGCTTTCCCACGAATAAATAATATAAGATTTTGACTTCTACCCCC 7147
>seq35
Length=832945
Score = 123 bits (136), Expect = 6e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | || || | || | ||| || || || |||| ||||| |||| ||||||
Sbjct 773429 CGAAGACGCAATACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTA 773488
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || || ||||| | || || || || || ||||| ||
Sbjct 773489 CGTCCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCTGGGGGAATGCCC 773548
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| ||| ||||||||||| |||| || || || ||
Sbjct 773549 TCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCCAAG 773608
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| |||| || || | ||| | |||||
Sbjct 773609 GTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 773649
Score = 118 bits (130), Expect = 3e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575
||| || || || |||| ||||| |||| |||||| | || || || |||||||| ||
Sbjct 773680 AGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTCCAGCTGCTTGCC 773739
Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
||||| || | || || || || || ||||| || |||||||| |||||||| |||
Sbjct 773740 GGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTT 773799
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
||| ||||||||||| |||| || || || | ||||| |||||||| |||| ||
Sbjct 773800 GACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGT 773859
Query 225696 TTTTATGAACACTTGCAT 225713
|| | ||| | |||||
Sbjct 773860 CTTCACGAAGATCTGCAT 773877
Score = 118 bits (130), Expect = 3e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575
||| || || || |||| ||||| |||| |||||| | || || || |||||||| ||
Sbjct 773908 AGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTCCAGCTGCTTGCC 773967
Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
||||| || | || || || || || ||||| || |||||||| |||||||| |||
Sbjct 773968 GGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTT 774027
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
||| ||||||||||| |||| || || || | ||||| |||||||| |||| ||
Sbjct 774028 GACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGT 774087
Query 225696 TTTTATGAACACTTGCAT 225713
|| | ||| | |||||
Sbjct 774088 CTTCACGAAGATCTGCAT 774105
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575
||| || || || |||| ||||| |||| |||||| | || || || |||||||| ||
Sbjct 774136 AGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTACGTCCGTCCTCCAGCTGCTTGCC 774195
Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
||||| || | || || || || || ||||| || |||||||| |||||||| |||
Sbjct 774196 GGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTT 774255
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
||| ||||||||||| |||| || || || | || || |||||||| |||| ||
Sbjct 774256 GACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTTATGGTCTTGCCAGTCAGGGT 774315
Query 225696 TTTTATGAACACTTGCATTTT 225716
|| | ||| | ||||| ||
Sbjct 774316 CTTCACGAAGATCTGCATGTT 774336
>seq234
Length=227530
Score = 107 bits (118), Expect = 5e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||| || | || | ||||| || || || | || ||||| | | ||
Sbjct 9914 ACGAAGCCGCAGTACCAAATGCAAGGTGGACTCCTTCTGAATGTTATAATCAGATAGTGT 9973
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| |||||||| | || || ||||||||||| | |||||||| || || ||||| ||
Sbjct 9974 TCGGCCATCTTCCAATTGTTTGCCAGCGAAGATCAAGCGTTGTTGATCTGGAGGAATTCC 10033
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| ||||| || ||||| || ||| ||||||||| || || | ||| || || |
Sbjct 10034 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAG 10093
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||||||||| | || |||| || | |||||
Sbjct 10094 AGTTATGGTCTTGCCCGTAAGGGTCTTTACAAAGATCTGCAT 10135
>seq300
Length=136790
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 90074 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 90133
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 90134 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 90193
Query 7855 GTTAGCT 7861
|||||||
Sbjct 90194 GTTAGCT 90200
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 90739 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 90681
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 90680 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 90636
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 87143 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 87084
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 87083 AAGACGACGTATAGGGCCTGAC 87062
>seq73
Length=471550
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 239433 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 239374
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 239373 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 239314
Query 7855 GTTAGCT 7861
|||||||
Sbjct 239313 GTTAGCT 239307
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Plus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 238768 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 238826
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 238827 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 238871
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 242364 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 242423
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 242424 AAGACGACGTATAGGGCCTGAC 242445
>seq22
Length=1073832
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 476266 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 476325
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 476326 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 476385
Query 7855 GTTAGCT 7861
|||||||
Sbjct 476386 GTTAGCT 476392
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 1048502 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 1048443
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 1048442 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 1048383
Query 7855 GTTAGCT 7861
|||||||
Sbjct 1048382 GTTAGCT 1048376
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 476931 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 476873
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 476872 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 476828
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Plus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 1047837 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 1047895
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 1047896 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 1047940
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 473335 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 473276
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 473275 AAGACGACGTATAGGGCCTGAC 473254
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 1051433 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 1051492
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 1051493 AAGACGACGTATAGGGCCTGAC 1051514
>seq15
Length=1383265
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 156890 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 156949
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 156950 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 157009
Query 7855 GTTAGCT 7861
|||||||
Sbjct 157010 GTTAGCT 157016
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 333307 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 333366
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 333367 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 333426
Query 7855 GTTAGCT 7861
|||||||
Sbjct 333427 GTTAGCT 333433
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 1026469 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 1026528
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 1026529 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 1026588
Query 7855 GTTAGCT 7861
|||||||
Sbjct 1026589 GTTAGCT 1026595
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 157555 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 157497
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 157496 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 157452
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 333972 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 333914
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 333913 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 333869
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 1027134 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 1027076
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 1027075 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 1027031
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 153959 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 153900
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 153899 AAGACGACGTATAGGGCCTGAC 153878
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 330376 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 330317
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 330316 AAGACGACGTATAGGGCCTGAC 330295
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 1023538 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 1023479
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 1023478 AAGACGACGTATAGGGCCTGAC 1023457
>seq8
Length=1553183
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 331906 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 331965
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 331966 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 332025
Query 7855 GTTAGCT 7861
|||||||
Sbjct 332026 GTTAGCT 332032
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 903711 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 903770
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA-CGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | ||| |||
Sbjct 903771 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTGTGCTTATCGC 903830
Query 7855 GTTAGCT 7861
|||||||
Sbjct 903831 GTTAGCT 903837
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 332571 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 332513
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 332512 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 332468
Score = 93.3 bits (102), Expect = 1e-13
Identities = 86/105 (82%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 904376 TGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 904318
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| ||||||| ||||||||| | || | ||||| || ||||
Sbjct 904317 CAGTGGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCAATG 904273
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 328975 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 328916
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 328915 AAGACGACGTATAGGGCCTGAC 328894
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683
|||| ||||| || |||||||||||||||| |||||||||||| ||| || |||| |
Sbjct 900780 GGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAAGTCGA 900721
Query 372684 AAAACGATGTATAGGGTCTGAC 372705
|| |||| |||||||| |||||
Sbjct 900720 AAGACGACGTATAGGGCCTGAC 900699
>seq1207
Length=4506
Score = 84.2 bits (92), Expect = 5e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| ||||| || |||||||||||||||||||| |||| | |
Sbjct 1281 TGGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATACTCCACTGCTTGTGCGGGTCC 1222
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT 7846
|||||| || |||||||||| | |||||| |||| | | |||| |||||
Sbjct 1221 CCGTCAATTCCTTTGAGTTTCAGTCTTGCGACCGTACTCCCCAGGCGGAAT 1171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192501634542890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |