Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq162 172 4e-38
>seq162
Length=246154
Score = 172 bits (190), Expect = 4e-38
Identities = 450/676 (67%), Gaps = 18/676 (3%)
Strand=Plus/Minus
Query 27063 AAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTC 27122
||| || || | | |||| ||| | | || || |||| | ||||| |||| ||||
Sbjct 68267 AAATTCTTCAATGTTCTCGACCTTTCGCTTGATTTTCAGCTTTGGAAACGGTCGTGGCTT 68208
Query 27123 CCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAG 27182
| || ||||| ||| || || || || || | || || || |||| ||| ||||
Sbjct 68207 GCGTTCTAGCTGCTCCTTTAGTGGATCAACATGGTTAAGATACACATGAGTGTCGCCCAT 68148
Query 27183 GGTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 27241
|||||||||||| || |||| ||| |||||| | || || || ||||||| ||||| |
Sbjct 68147 GGTGTGGACAAAATCGCCCGTCTTCAAGCCCGTT-ACATGTGCAATCATGTGGGTGAGCA 68089
Query 27242 GAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGA 27301
| | ||| ||||||||| ||||| || || || |||||||| | || ||| || |
Sbjct 68088 GGGCATAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCGGCGCTCCGCTGATACA 68029
Query 27302 GCTGACACGAGAGCTCTCCATCGCTT-------ACGTAAAACTGACATATGGCGTGGCAC 27354
|||| || ||||||||||| ||| | ||||| || || | | ||||||
Sbjct 68028 GCTGGCAGGAGAGCTCTCC-TCGAGTTTGAGAGACGTAGAATTGTGCAAGGCAGTGGCAG 67970
Query 27355 GGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTG 27414
|| || | ||||| | ||| ||| ||||||||| ||| |||||||| |
Sbjct 67969 GGGGGTAATGCCATTTTTGGTATGTCCAGGGGATTCCAGGCGGACATAATGATGCGACGA 67910
Query 27415 TCTTCTGGGTTGTTCCTGATGAGGTCC--ACGGCGTTTTGCAGCTGATCCACCCCCATCC 27472
|| ||| || | |||||| ||||| | | | ||| ||| || | ||| | |
Sbjct 67909 TCGGATGGATTATCCCTGAT--GGTCCTAATTACCTGGCGCAACTGGTCGATTCCCTTGC 67852
Query 27473 CCGAGTAGTC-TACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCG 27531
| |||||| | | || || | ||||| || || || || | ||| || || ||
Sbjct 67851 CGCTGTAGTCATCGTCGCAGGTGC-CATACTCGGCACCAAAGTGTCGCCACTGAAAGCCA 67793
Query 27532 TACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCT 27591
|| || || ||||| |||||| | | | || | | |||| |||||| | ||| |||
Sbjct 67792 TAGACAGGACCCAGATCTCCCACGGCGCGGTCCGTGTGGCCCAGCTTGTCTAGAAACTCT 67733
Query 27592 CTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC-TCGGAGAGCTCTTTGGAGTTTGT 27650
|||| | |||| | ||||| || | || |||| | | || ||| | | | |||
Sbjct 67732 CTGGTGCTGTTGCCATCCCAAATGTGCACGTTCTTCGCCTGCAAGAGCTTCGCA-TCTGT 67674
Query 27651 GGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGT 27710
|| || ||||| ||||||||||||||||| ||| | || |||| ||||||
Sbjct 67673 CTTTCCGGCCACAAACCATAGCAGCTCCTCCACGACCGCCCGAAAGAACACCCGCTTGGT 67614
Query 27711 CGTGAGGAGGGGAAAC 27726
|| || |||||||||
Sbjct 67613 GGTCAGCAGGGGAAAC 67598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369498485980985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |