Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_030943.1
Length=54990
Score E
Sequences producing significant alignments: (Bits) Value
seq73 122 3e-23
seq26 122 3e-23
seq15 122 3e-23
seq8 122 3e-23
seq350 109 2e-19
seq300 104 8e-18
>seq73
Length=471550
Score = 122 bits (134), Expect = 3e-23
Identities = 213/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 266208 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 266267
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 266268 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 266320
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| ||||||||| | |||||| |||| | | || | |||
Sbjct 266321 GAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 266380
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||| |||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 266381 CACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTCTGGACATAGGTGAAGTC 266440
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || ||| | || |||||| |||||||||| |||| | ||
Sbjct 266441 CGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 266500
Query 53416 CCGGGG 53421
| |||
Sbjct 266501 ACAGGG 266506
>seq26
Length=998041
Score = 122 bits (134), Expect = 3e-23
Identities = 213/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 434468 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 434527
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 434528 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 434580
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| ||||||||| | |||||| |||| | | || | |||
Sbjct 434581 GAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 434640
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||| |||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 434641 CACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTCTGGACATAGGTGAAGTC 434700
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || ||| | || |||||| |||||||||| |||| | ||
Sbjct 434701 CGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 434760
Query 53416 CCGGGG 53421
| |||
Sbjct 434761 ACAGGG 434766
Score = 109 bits (120), Expect = 2e-19
Identities = 210/306 (69%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 174341 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 174400
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 174401 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 174453
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| |||||||| | |||||| |||| | | || | |||
Sbjct 174454 GAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 174513
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||||||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 174514 CACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTCTGGACATAGGTAAAGTC 174573
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || | | || |||||| |||||||||| |||| | ||
Sbjct 174574 CGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 174633
Query 53416 CCGGGG 53421
| |||
Sbjct 174634 ACAGGG 174639
Score = 82.4 bits (90), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 53782 GGGCGGTCGATCTCCGCC---GCAAAGAAAGCCGAAGCCTGCTTCAAGATCGTGTTCGCT 53838
|||||||||| ||||||| ||||| ||||||| |||| ||||| |||| || ||
Sbjct 174991 GGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCTTCTTCAGGATCTCATTGGCC 175050
Query 53839 CGCCGCAGTTCACGGTTCTCCCGCTCCAACGCCGCGATGCG 53879
| |||||||||||| ||| |||||||||||| ||| ||
Sbjct 175051 TGACGCAGTTCACGGACCTCACGCTCCAACGCCTTGATCCG 175091
>seq15
Length=1383265
Score = 122 bits (134), Expect = 3e-23
Identities = 213/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 659380 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 659321
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 659320 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 659268
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| ||||||||| | |||||| |||| | | || | |||
Sbjct 659267 GAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 659208
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||| |||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 659207 CACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTCTGGACATAGGTGAAGTC 659148
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || ||| | || |||||| |||||||||| |||| | ||
Sbjct 659147 CGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 659088
Query 53416 CCGGGG 53421
| |||
Sbjct 659087 ACAGGG 659082
Score = 109 bits (120), Expect = 2e-19
Identities = 210/306 (69%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 1072633 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 1072692
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 1072693 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 1072745
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| |||||||| | |||||| |||| | | || | |||
Sbjct 1072746 GAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 1072805
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||||||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 1072806 CACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTCTGGACATAGGTAAAGTC 1072865
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || | | || |||||| |||||||||| |||| | ||
Sbjct 1072866 CGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 1072925
Query 53416 CCGGGG 53421
| |||
Sbjct 1072926 ACAGGG 1072931
Score = 109 bits (120), Expect = 2e-19
Identities = 210/306 (69%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 1094057 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 1093998
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 1093997 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 1093945
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| |||||||| | |||||| |||| | | || | |||
Sbjct 1093944 GAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 1093885
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||||||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 1093884 CACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTCTGGACATAGGTAAAGTC 1093825
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || | | || |||||| |||||||||| |||| | ||
Sbjct 1093824 CGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 1093765
Query 53416 CCGGGG 53421
| |||
Sbjct 1093764 ACAGGG 1093759
Score = 82.4 bits (90), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 53782 GGGCGGTCGATCTCCGCC---GCAAAGAAAGCCGAAGCCTGCTTCAAGATCGTGTTCGCT 53838
|||||||||| ||||||| ||||| ||||||| |||| ||||| |||| || ||
Sbjct 1073283 GGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCTTCTTCAGGATCTCATTGGCC 1073342
Query 53839 CGCCGCAGTTCACGGTTCTCCCGCTCCAACGCCGCGATGCG 53879
| |||||||||||| ||| |||||||||||| ||| ||
Sbjct 1073343 TGACGCAGTTCACGGACCTCACGCTCCAACGCCTTGATCCG 1073383
Score = 82.4 bits (90), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 53782 GGGCGGTCGATCTCCGCC---GCAAAGAAAGCCGAAGCCTGCTTCAAGATCGTGTTCGCT 53838
|||||||||| ||||||| ||||| ||||||| |||| ||||| |||| || ||
Sbjct 1093407 GGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCTTCTTCAGGATCTCATTGGCC 1093348
Query 53839 CGCCGCAGTTCACGGTTCTCCCGCTCCAACGCCGCGATGCG 53879
| |||||||||||| ||| |||||||||||| ||| ||
Sbjct 1093347 TGACGCAGTTCACGGACCTCACGCTCCAACGCCTTGATCCG 1093307
>seq8
Length=1553183
Score = 122 bits (134), Expect = 3e-23
Identities = 213/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 280559 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 280618
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 280619 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 280671
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| ||||||||| | |||||| |||| | | || | |||
Sbjct 280672 GAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 280731
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||| |||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 280732 CACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTCTGGACATAGGTGAAGTC 280791
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || ||| | || |||||| |||||||||| |||| | ||
Sbjct 280792 CGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 280851
Query 53416 CCGGGG 53421
| |||
Sbjct 280852 ACAGGG 280857
Score = 122 bits (134), Expect = 3e-23
Identities = 213/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 296721 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 296662
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 296661 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 296609
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| ||||||||| | |||||| |||| | | || | |||
Sbjct 296608 GAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 296549
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||| |||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 296548 CACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTCTGGACATAGGTGAAGTC 296489
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || ||| | || |||||| |||||||||| |||| | ||
Sbjct 296488 CGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 296429
Query 53416 CCGGGG 53421
| |||
Sbjct 296428 ACAGGG 296423
Score = 122 bits (134), Expect = 3e-23
Identities = 213/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 375323 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 375264
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 375263 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 375211
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| ||||||||| | |||||| |||| | | || | |||
Sbjct 375210 GAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 375151
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||| |||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 375150 CACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTCTGGACATAGGTGAAGTC 375091
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || ||| | || |||||| |||||||||| |||| | ||
Sbjct 375090 CGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 375031
Query 53416 CCGGGG 53421
| |||
Sbjct 375030 ACAGGG 375025
Score = 122 bits (134), Expect = 3e-23
Identities = 213/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 415594 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 415535
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 415534 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 415482
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| ||||||||| | |||||| |||| | | || | |||
Sbjct 415481 GAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 415422
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||| |||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 415421 CACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTCTGGACATAGGTGAAGTC 415362
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || ||| | || |||||| |||||||||| |||| | ||
Sbjct 415361 CGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 415302
Query 53416 CCGGGG 53421
| |||
Sbjct 415301 ACAGGG 415296
Score = 122 bits (134), Expect = 3e-23
Identities = 213/306 (70%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 480215 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 480156
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 480155 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 480103
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| ||||||||| | |||||| |||| | | || | |||
Sbjct 480102 GAGCACGAACTGGGTGGTCATGGAGGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 480043
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||| |||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 480042 CACATCAATGACAAACGCCACATAGACCATGCCATTCCAGGTCTGGACATAGGTGAAGTC 479983
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || ||| | || |||||| |||||||||| |||| | ||
Sbjct 479982 CGAGACCCAGAGCTGGTTGGGGGCCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 479923
Query 53416 CCGGGG 53421
| |||
Sbjct 479922 ACAGGG 479917
Score = 109 bits (120), Expect = 2e-19
Identities = 210/306 (69%), Gaps = 8/306 (3%)
Strand=Plus/Minus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 885445 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 885386
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 885385 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 885333
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| |||||||| | |||||| |||| | | || | |||
Sbjct 885332 GAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 885273
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||||||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 885272 CACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTCTGGACATAGGTAAAGTC 885213
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || | | || |||||| |||||||||| |||| | ||
Sbjct 885212 CGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 885153
Query 53416 CCGGGG 53421
| |||
Sbjct 885152 ACAGGG 885147
Score = 82.4 bits (90), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 53782 GGGCGGTCGATCTCCGCC---GCAAAGAAAGCCGAAGCCTGCTTCAAGATCGTGTTCGCT 53838
|||||||||| ||||||| ||||| ||||||| |||| ||||| |||| || ||
Sbjct 884795 GGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCTTCTTCAGGATCTCATTGGCC 884736
Query 53839 CGCCGCAGTTCACGGTTCTCCCGCTCCAACGCCGCGATGCG 53879
| |||||||||||| ||| |||||||||||| ||| ||
Sbjct 884735 TGACGCAGTTCACGGACCTCACGCTCCAACGCCTTGATCCG 884695
>seq350
Length=115716
Score = 109 bits (120), Expect = 2e-19
Identities = 210/306 (69%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 51826 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 51885
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 51886 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 51938
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| |||||||| | |||||| |||| | | || | |||
Sbjct 51939 GAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 51998
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||||||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 51999 CACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTCTGGACATAGGTAAAGTC 52058
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| || | | || |||||| |||||||||| |||| | ||
Sbjct 52059 CGAGACCCAGAGCTGGTTGGGGCTCTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 52118
Query 53416 CCGGGG 53421
| |||
Sbjct 52119 ACAGGG 52124
Score = 82.4 bits (90), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 53782 GGGCGGTCGATCTCCGCC---GCAAAGAAAGCCGAAGCCTGCTTCAAGATCGTGTTCGCT 53838
|||||||||| ||||||| ||||| ||||||| |||| ||||| |||| || ||
Sbjct 36129 GGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCTTCTTCAGGATCTCATTGGCC 36070
Query 53839 CGCCGCAGTTCACGGTTCTCCCGCTCCAACGCCGCGATGCG 53879
| |||||||||||| ||| |||||||||||| ||| ||
Sbjct 36069 TGACGCAGTTCACGGACCTCACGCTCCAACGCCTTGATCCG 36029
Score = 82.4 bits (90), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 53782 GGGCGGTCGATCTCCGCC---GCAAAGAAAGCCGAAGCCTGCTTCAAGATCGTGTTCGCT 53838
|||||||||| ||||||| ||||| ||||||| |||| ||||| |||| || ||
Sbjct 52476 GGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCTTCTTCAGGATCTCATTGGCC 52535
Query 53839 CGCCGCAGTTCACGGTTCTCCCGCTCCAACGCCGCGATGCG 53879
| |||||||||||| ||| |||||||||||| ||| ||
Sbjct 52536 TGACGCAGTTCACGGACCTCACGCTCCAACGCCTTGATCCG 52576
>seq300
Length=136790
Score = 104 bits (114), Expect = 8e-18
Identities = 209/306 (68%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 53117 GCCAGTCGTTCGGTGTAGCGGATGGCTCGGTATTGCACTCCGCGGTCGGAGTGGTGGATC 53176
||||| |||||||| || ||||| | | ||||| ||| ||||| || || ||||||
Sbjct 75996 GCCAGGCGTTCGGTATATCGGATCGACAGATATTGTGATCCACGGTCCGAATGATGGATC 76055
Query 53177 AGCCCGGCCACGTCGTGGCCGGCACGCGACCGTGCCCACAATCCCATGTTCA-GGGCGTC 53235
||| ||| | || || ||| || ||| ||| | || |||||| |||||||
Sbjct 76056 AGC---GCC---TTGTTTCCCGCAGGCTTTCGTTGCCAGATGGCC-TGTTCAAGGGCGTC 76108
Query 53236 GAGGGCGAGGTCGGTGTGCATGGTGGTCGAGACCTGCCAGCCGACGACCATCCGCGAGAA 53295
||| ||| | |||| ||||| |||||||| | |||||| |||| | | || | |||
Sbjct 76109 GAGCACGAACTGGGTGGTCATGGAAGTCGAGACTTTCCAGCCCACGATCCTGCGGGCGAA 76168
Query 53296 CACGTCCAGGACGAACGCCGCGTACACCCAGCCCGAGTGGGTGCGGATGTAGGTCAGGTC 53355
||| || | ||||||||| | || ||| ||| ||| ||| ||||| | |||
Sbjct 76169 CACATCAATGACGAACGCTACATAGACCATGCCATTCCAGGTCTGGACATAGGTAAAGTC 76228
Query 53356 CGCCACCCACAACGCGTTCGGTGCCGCCGCGGTGAACTGACGGTTGACCCGGTCAGCCGG 53415
|| ||||| | | ||| | | | || |||||| |||||||||| |||| | ||
Sbjct 76229 CGAGACCCAGAGCTGGTTGGAGAACTCGGCCCGGAACTGCCGGTTGACCCTGTCATCGGG 76288
Query 53416 CCGGGG 53421
| |||
Sbjct 76289 ACAGGG 76294
Score = 82.4 bits (90), Expect = 3e-11
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 53782 GGGCGGTCGATCTCCGCC---GCAAAGAAAGCCGAAGCCTGCTTCAAGATCGTGTTCGCT 53838
|||||||||| ||||||| ||||| ||||||| |||| ||||| |||| || ||
Sbjct 76646 GGGCGGTCGAGCTCCGCCTGTGCAAAATAAGCCGAGGCCTTCTTCAGGATCTCATTGGCC 76705
Query 53839 CGCCGCAGTTCACGGTTCTCCCGCTCCAACGCCGCGATGCG 53879
| |||||||||||| ||| |||||||||||| ||| ||
Sbjct 76706 TGACGCAGTTCACGGACCTCACGCTCCAACGCCTTGATCCG 76746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175842359379440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |