Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq328 706 0.0
>seq328
Length=165906
Score = 706 bits (782), Expect = 0.0
Identities = 1281/1854 (69%), Gaps = 34/1854 (2%)
Strand=Plus/Minus
Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457
||||||||||| |||| ||| ||||| || |||||||| || |||| | | |||
Sbjct 107378 GCTGGTTTTGTGCGTAAATAATACATTCCGGTTTTTAGTCCAGCTTTCCAGGAGAAAAAA 107319
Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517
|| ||| ||| | ||| || | || ||||| | ||||| ||| | ||||||||||
Sbjct 107318 TGTATGGATGTCAATTTTCCGTAGTTAGGCTCGGCCACATGAACATTAAACGACTGACTT 107259
Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577
||||| || || || ||||||||||| ||||| || || ||| || | |||||||
Sbjct 107258 TGATCAATAAATGCACCTCTATCAGCAGCCATCTTAATTGTGGATTTAACTGAAATTTCC 107199
Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCT---GGAAGATTTG---TATTTTGAATG 75631
|| | ||||| ||| | | | | ||| | |||| | || |||||||||||
Sbjct 107198 CACACTGTTTTATAAA---GATCGCGAACATTTTGGGGAATAGTTTCAATATTTTGAATG 107142
Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTT 75691
|| || | | || || ||| |||| || || ||||||| ||| || | ||| |||
Sbjct 107141 GAGCCCCTACTTGAAATTATTTTATTTTTCATATCATCATCCCATAAGTCCAACTCTGTT 107082
Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751
||| | || | | |||| |||| || | ||||||||| ||||| ||||||| || ||
Sbjct 107081 AAATCCCTTAATAAATGATGATTGACCACTTGAAATTCACCAGATAATACTCGTCTCGTA 107022
Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811
|| |||||| | ||||||||||| | ||||| || || |||| |||||| ||||| ||
Sbjct 107021 TATATATTAGTTGTATATGGTTCGAATGATTCGTTATTACCCATAATTTGGGCAGTAGAT 106962
Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871
|| || |||||||| || || || || ||| || | || ||| || | || | |||
Sbjct 106961 GCTGTAGGCATAGGAGCTACTAACAACGAATTCCTAATTCCGTGTTTTTTAATGTCTTCT 106902
Query 75872 TTTAGATATTTCCAATCCCA-AAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAG 75930
|| || | || ||||||||| ||| || | ||| |||||| | ||| ||||||||
Sbjct 106901 TTCAGGTTTTGCCAATCCCATAAGTTC-GTTGGAGTTTTATCCCACATATCATATTGTAG 106843
Query 75931 AATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAG 75990
||| || ||||| || ||| ||||| |||||||| | || ||| || ||
Sbjct 106842 AATGCCATTGCTTACAGGACTTCCTTTATAGGTTTCGTACGGACCAAATATTTGAGAAAG 106783
Query 75991 TTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTA--TTAAGA 76048
||| ||||| || ||||| || || ||||||| ||||| || || || || |||| |
Sbjct 106782 TTCACAACTAGCTTCTAAAGCCCCAAAATAAATAGTTTCAAATAT-TTGTTGGTTTAAAA 106724
Query 76049 TCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCC 76108
| ||||| ||| ||| | ||| || | | ||||| || || || || | ||
Sbjct 106723 GACTA-GCTTCTTCACTTTCATAGGGAAAACGCATTAGAATTAAAGCGTCAGCGAAACCT 106665
Query 76109 TGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGG 76168
||||| || |||||||| || | ||| || |||||| | | ||||||||| | |||
Sbjct 106664 TGAACACCTATACCAATTGGACGATGCCTTAAATTGGATTTCTTAGCTTCTGGCAAGGGG 106605
Query 76169 TAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTT 76228
||||| || || ||||| |||||||| |||||| | |||| ||| || || |||
Sbjct 106604 TAATAGTTGATGTCTATTATTTTATTAAGATTTTTAGCAACAGTTTTGGTTACATCTTTT 106545
Query 76229 AGTTTGAGAAAATCAAATTTTCCATCTA---TCACAAACATATTAAGAGCTATAGATGCT 76285
| ||| ||||||||| || ||| | |||||||| ||||| || || || |||
Sbjct 106544 AATTTTTTGAAATCAAATGTTTTTTCTGGTGTTACAAACATGTTAAGTGCAATTGAAGCT 106485
Query 76286 AGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTA 76345
| ||| ||||| || | ||||| || | || | | || || || |||| ||||
Sbjct 106484 AAATTGCAAACAGCGATCTCATCAGGTGCAGAGTACTCAACAATTTCTGTACATAAATTA 106425
Query 76346 CTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAA 76405
|| || || ||||| |||| ||||||||| ||||||||| | ||||| || |||||| ||
Sbjct 106424 CTGCATTTAATAGTGCCAACATTTTGTTGATTGCTCTTTCTATTACAGGAATCCTTAAAA 106365
Query 76406 AGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGA-CGACTCT 76464
|| | | || | |||||||||| || ||||| ||||| | ||| | |||||
Sbjct 106364 AGCATGTATGGGTTACCAGTTTCAACTTGCGATTCTATAATGGCAAACCATAACGACTG- 106306
Query 76465 AGCTTTTATTATA-GATTTGTATCGCTTCTCTCTT--TCATATTGTGTATATAACCGTTC 76521
|||||| | | | |||| | | | || ||||| ||||||| ||| | | ||
Sbjct 106305 AGCTTTCACTGTTCGATTAGCA---CGTCCCTCTTGCTCATATTTGACATAAAGTTGCTC 106249
Query 76522 AAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCA 76581
||||| || ||||||||||| | | |||||||||| || ||||||||||| |||||
Sbjct 106248 AAATTTTTCGCCCCAAACATCTTGAAGTCCAGGACATTTATGTGGACACATCAACGACCA 106189
Query 76582 CTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 76641
| ||| | | | |||||||||||| || ||||| || ||||||| |||| ||| ||
Sbjct 106188 GTTTTCATTTGCTTCAACCCGTTTCATGAAAAGATCGGGAATCCATAAAGCATAAAAAAG 106129
Query 76642 ATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAAT 76701
||| || | || |||||| ||||| || || |||| || |||| || || | ||
Sbjct 106128 ATCCCGTGCTCGGTTTTCTTCTTTTCCAGTGTTTCTTTTGAGGTCTAAAAATTCAAAAAC 106069
Query 76702 ATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTG 76761
||| |||||||| || |||| ||| || || | |||| |||| ||| |||||||||
Sbjct 106068 ATCTGAATGCCAGGGCTCTAAATAAATAGCAAAGGCACCAGGTCTTTTTCCACCTCCCTG 106009
Query 76762 ATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAA-TAATGCCGTTAGATG 76820
||| | ||||| || |||||| | ||||| | |||||||| |||| || || || |
Sbjct 106008 ATCAACATATCGTGCCACATTATTAAATACTCTTAGCATTGGAACTAAT-CCATTTGAAG 105950
Query 76821 TACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTA 76880
|||| || |||||| | || || | || ||||||||| | || | || || |
Sbjct 105949 TACCGTTCGTTCCACATATGGAAGTGCCTTTGGCACGAATACAATGAACATTAAGTCCAA 105890
Query 76881 TTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTA 76940
|||| || || ||| || || | ||||| ||| | || | | | || || || |
Sbjct 105889 TTCCACCCGCTGATTTGGAAATCATTGCACATTGTTCAACTGATTTAAAAATACCTTCAA 105830
Query 76941 TACTATC---ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997
| ||| || ||| ||| || ||||||||| || | |||| | || ||
Sbjct 105829 TTGAATCCGAATTCAT--TGTCAA-AAGAAAACATGAGGATAGTTGAGGGCGATTTGTAG 105773
Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057
| ||| ||| | || || || ||||| || || || || |||||||| ||||| |
Sbjct 105772 CAGCAGCAAAAAGAGTTGGCGAGGCATGCGTAAAATATCGCTCTGAAAGTAGGTTGTAAG 105713
Query 77058 TTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117
|||||| | |||| | ||||| | |||||| || | |||||| ||||| | ||| |
Sbjct 105712 TTTCAACAGCTGCACCAATATCGTCTCCATGAATACCAAGAGCGACGCGCATTAGCATGT 105653
Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177
| || || || ||| || | || ||||||||| | || || || || | || |
Sbjct 105652 GTTGTGGACGCTCTGCAATTTTCCCATTTATTTTAAGTAAATAGGAACGCTCGAGCGTCT 105593
Query 77178 TAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231
|||| ||||||||||| || || || | || ||||||||| | || ||||
Sbjct 105592 TAAATCCAAAATAGTTATAACCGAAATCACGATCATAAATAATAGCAGAGTTTA 105539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712917155899200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |