Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_031077.1
Length=41760
Score E
Sequences producing significant alignments: (Bits) Value
seq26 93.3 1e-14
>seq26
Length=998041
Score = 93.3 bits (102), Expect = 1e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 28626 TGCTTACCGATACCAAACTGAAAAACCTGAAGCCTCAGGACAAACTCTATAAAGTTTCTG 28685
|||| || |||||||||||| || || ||||| ||| || || || || || ||
Sbjct 159650 TGCTGACTGATACCAAACTGCGCAATCTCAAGCCGACGGATAAGCTTTACAAGGTGAATG 159709
Query 28686 ACCGTGACGGGCTGTACGTAGCCGTG-CTCATATCAGGCTCTGTCTCGTTCCGCTATGAC 28744
|||| |||||||||||||| || ||| | | | | ||| |||||||||| ||| ||
Sbjct 159710 ACCGCGACGGGCTGTACGTCGCGGTGACACCT-GCGGGCAGCATCTCGTTCCGATATAAC 159768
Query 28745 TACAGAATCAACGGCCGCCGGGAAACTCTGGTGATTGGTCAGTATGGTCGTGACGGTATC 28804
|| ||| ||||| | | ||| |||||| |||| | |||||| || || |||
Sbjct 159769 TATGCGATCCACGGCAGGCAGGAGACTCTGACCTTTGGCCGGTATGGCGTTGGGGGCATC 159828
Query 28805 AGCCTGGCGGAAGCGCGGGAAGAACTCATTGCGGCTAAAAAGTTGCTC 28852
| ||||| ||||| || || || | | |||||||||| || ||
Sbjct 159829 ACTCTGGCCGAAGCCCGTGAGCAATTAGGGGAGGCTAAAAAGCTGATC 159876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133507332181340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |