Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq26 93.3 1e-14 >seq26 Length=998041 Score = 93.3 bits (102), Expect = 1e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 28626 TGCTTACCGATACCAAACTGAAAAACCTGAAGCCTCAGGACAAACTCTATAAAGTTTCTG 28685 |||| || |||||||||||| || || ||||| ||| || || || || || || Sbjct 159650 TGCTGACTGATACCAAACTGCGCAATCTCAAGCCGACGGATAAGCTTTACAAGGTGAATG 159709 Query 28686 ACCGTGACGGGCTGTACGTAGCCGTG-CTCATATCAGGCTCTGTCTCGTTCCGCTATGAC 28744 |||| |||||||||||||| || ||| | | | | ||| |||||||||| ||| || Sbjct 159710 ACCGCGACGGGCTGTACGTCGCGGTGACACCT-GCGGGCAGCATCTCGTTCCGATATAAC 159768 Query 28745 TACAGAATCAACGGCCGCCGGGAAACTCTGGTGATTGGTCAGTATGGTCGTGACGGTATC 28804 || ||| ||||| | | ||| |||||| |||| | |||||| || || ||| Sbjct 159769 TATGCGATCCACGGCAGGCAGGAGACTCTGACCTTTGGCCGGTATGGCGTTGGGGGCATC 159828 Query 28805 AGCCTGGCGGAAGCGCGGGAAGAACTCATTGCGGCTAAAAAGTTGCTC 28852 | ||||| ||||| || || || | | |||||||||| || || Sbjct 159829 ACTCTGGCCGAAGCCCGTGAGCAATTAGGGGAGGCTAAAAAGCTGATC 159876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133507332181340