Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01]
1,935 sequences; 181,868,570 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq35 167 5e-36
seq6 161 2e-34
seq23 159 7e-34
seq134 125 1e-23
seq145 89.7 1e-12
seq125 89.7 1e-12
seq75 89.7 1e-12
seq7 89.7 1e-12
seq39 87.8 4e-12
seq15 87.8 4e-12
>seq35
Length=832945
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || || || || |||||||||||||| |
Sbjct 773651 CCACCGCGCAGGCGGAGCACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 773710
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| || |||||||| || || || |||
Sbjct 773711 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGATCTGGGGGA 773770
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 773771 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 773830
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| ||||| ||||| ||||||||
Sbjct 773831 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 773877
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || || || || |||||||||||||| |
Sbjct 773879 CCACCGCGCAGGCGGAGCACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 773938
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| || |||||||| || || || |||
Sbjct 773939 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGATCTGGGGGA 773998
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 773999 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 774058
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| ||||| ||||| ||||||||
Sbjct 774059 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 774105
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| |||||||| || |||| ||| || || || || |||||||||||||| |
Sbjct 774107 CCACCGCGCAGGCGGAGCACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 774166
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||| || |||||||| || || || |||
Sbjct 774167 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGATCTGGGGGA 774226
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 774227 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 774286
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| || || ||||| || |||| ||||| ||||| |||||||| ||
Sbjct 774287 TCGAGGGTTATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGTT 774336
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || | ||||| ||| || || || || |||||||||||||| |
Sbjct 773423 CCACCGCGAAGACGCAATACCAAATGCAAAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 773482
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || || || ||||| || || || ||||||||||||||||| || || || |||
Sbjct 773483 AAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGATCTGGGGGA 773542
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 773543 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACC 773602
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| || |||| ||||| ||||| ||||||||
Sbjct 773603 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 773649
>seq6
Length=3104374
Score = 161 bits (178), Expect = 2e-34
Identities = 175/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || |||| || | || || || |||||||||||||| |
Sbjct 2898481 ACCACCACGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 2898422
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| ||||||| ||| || || || ||
Sbjct 2898421 CAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 2898362
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| || || || | ||||| ||||| || | |||||
Sbjct 2898361 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGAC 2898302
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
|| | ||||| ||||| || || | ||| || || || || |||||||||
Sbjct 2898301 CTCCAAGGTGATGGTCTTGCCAGTGAGAGTTTTCACAAAAATTTGCATTTTC 2898250
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 590287 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 590231
>seq23
Length=1278451
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | ||| || || ||||||||||||||||
Sbjct 1263406 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1263465
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 1263466 AAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGG 1263525
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 1263526 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAAC 1263585
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || |||| |||||| || || ||||||||
Sbjct 1263586 CTCCAGGGTGATGGTTTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 1263633
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | ||| || || ||||||||||||||||
Sbjct 1263634 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1263693
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 1263694 AAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGG 1263753
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 1263754 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAAC 1263813
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || |||| |||||| || || ||||||||
Sbjct 1263814 CTCCAGGGTGATGGTTTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 1263861
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | ||| || || ||||||||||||||||
Sbjct 1263862 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1263921
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 1263922 AAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGG 1263981
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 1263982 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAAC 1264041
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || |||| |||||| || || ||||||||
Sbjct 1264042 CTCCAGGGTGATGGTTTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 1264089
Score = 156 bits (172), Expect = 9e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||| ||| | ||| || || ||||||||||||||||
Sbjct 1264090 ACCACCGCGGAGACGCAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1264149
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 1264150 AAGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGG 1264209
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 1264210 GATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAAC 1264269
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| | ||||| || || || ||||| || || || || |||||||||||
Sbjct 1264270 CTCCAAGGTGATGGTTTTGCCAGTCAAGGTTTTCACAAAGATCTGCATTTT 1264320
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || |||| ||| | || || || |||||||||||||||| |
Sbjct 1263179 CCACCGCGGAGACGCAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAA 1263238
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||||||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 1263239 AGAGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 1263298
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || ||| | || || ||||| || | || ||
Sbjct 1263299 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCAACC 1263358
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || |||| |||||| || || ||||||||
Sbjct 1263359 TCCAGGGTGATGGTTTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 1263405
>seq134
Length=322322
Score = 125 bits (138), Expect = 1e-23
Identities = 189/269 (70%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839
||||||||||| | || || ||| ||||||||| || || || | ||| ||||||
Sbjct 20608 GTGAAAATGTAACGAGCGCTGGCACAGTCCTTGCCGCCCGTCAACCGAGTACCGAACTGA 20667
Query 273840 CCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACG 273899
|| ||| ||| |||| |||||||| |||||||| | ||| |||| |||||||
Sbjct 20668 CCGCGCGGCTCCAGCAAGTTGATGTTGTTCGAGCCGACGTAGTTCTGGGCCAGATTCACG 20727
Query 273900 ATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACCA 273959
|||||| ||| ||||| |||||||||||||| || || || || | |||||
Sbjct 20728 ATAGTCATCTGGAGGGAAACCTCGCCGTGGTGGTATGCCGACATCTCAGCCACGGAACCA 20787
Query 273960 CTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAACACC 274019
| ||| || |||||||| |||| | | ||| |||||||| || ||| |||
Sbjct 20788 GACAGCTGGGCCACCTTCACCTCGCGCTTGTCGTTGCGCTTGAAGCAGGTGAACATGACC 20847
Query 274020 TTCCGCTGCGAGGGCTTGAACCCATCAAC 274048
|| ||||| ||||||| ||||| ||
Sbjct 20848 TTGCGCTGTCCCGGCTTGAGGCCATCCAC 20876
>seq145
Length=278902
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 116707 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 116763
>seq125
Length=370239
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 60629 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 60573
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 62344 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 62288
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 69588 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 69644
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 106659 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 106603
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 333571 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 333627
>seq75
Length=472512
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 270183 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 270239
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 270610 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 270554
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 272418 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 272474
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 272845 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 272789
Score = 86.0 bits (94), Expect = 1e-11
Identities = 54/57 (95%), Gaps = 1/57 (2%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 271377 TAGTATAGTGGTCAGTATCCC-GCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 271322
>seq7
Length=1698838
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
|||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 621133 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCG 621077
>seq39
Length=736423
Score = 87.8 bits (96), Expect = 4e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 301430 TGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGT 301489
|||| || ||| | ||||| ||||| || ||||||||||| || ||||| || || |
Sbjct 655855 TGGATCCGTATCTGAACGTTGATCCTGGCACGATGAGCCCCTACCAGCATGGTGAGGTTT 655914
Query 301490 TCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547
| || |||||||| || || ||||| ||||| || || ||||| || || || |||||
Sbjct 655915 TTGTCACGGATGACGGAGCGGAAACAGATCTTGACCTTGGGCATTATGAGCGCTTCAC 655972
>seq15
Length=1383265
Score = 87.8 bits (96), Expect = 4e-12
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 301430 TGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGT 301489
|||| || ||| | ||||| ||||| || ||||||||||| || ||||| || || |
Sbjct 7832 TGGATCCGTATCTGAACGTTGATCCTGGTACGATGAGCCCCTACCAGCATGGTGAGGTTT 7891
Query 301490 TCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547
| || |||||||| || || ||||| ||||| || || ||||| || || || |||||
Sbjct 7892 TTGTCACGGATGACGGAGCGGAAACAGATCTTGACCTTGGGCATTATGAGCGCTTCAC 7949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046713249045490
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