Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1592 105 7e-18 >seq1592 Length=614636 Score = 105 bits (116), Expect = 7e-18 Identities = 295/450 (66%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 16183 TAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAG 16242 ||| || | | |||| || ||| |||||||| || || |||||||| | | ||| || Sbjct 387659 TAGATGGTGATACATGAGCACCGCAAAGTCGCAGTGAAGACCTTCGTCACGGGAGATCAG 387718 Query 16243 TTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGC 16302 |||||||| || || | || ||||| || || ||||| | ||| || |||| || Sbjct 387719 CTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTCAGCCAAAAGATCGAGGC 387778 Query 16303 AAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTA 16362 ||| || |||||| || || || || | ||||| || || | || || || | Sbjct 387779 AAAGCTGCCACTAAAGAAGATTCCTTCCACGGCCGCAAAGGCAATAATACGCTCGGCAAA 387838 Query 16363 CGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAAT 16421 | || ||| | || ||||| | |||| || || || | |||| | Sbjct 387839 GTTGGCCGATTTCG-AGGATATCCAGGACATGGCCCAGTCCGCCTTGCGCTTTACAGCCG 387897 Query 16422 CCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTAT 16481 ||| || || || || || ||||| | || ||||| || ||| || || | Sbjct 387898 GCATGGTCTCAATAGCATTGAACAAGTAGTCGCGCTCCTGCGGCTCCCGTATGTAGGTGT 387957 Query 16482 CAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGA 16541 |||| || | |||||||| || ||||| | ||||| ||||||||||| || || |||| Sbjct 387958 CAATGAGCACGCTGTACATCTCGGAGTGCACATTCTCCATGGCTATCTGGAAGCCGTAGA 388017 Query 16542 AGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCA 16601 |||| || ||||| | || || || ||| ||| || || ||| ||||| || | Sbjct 388018 AGCAACGTGCCTCTGTGATCTGCACCTCCTGACTAAAGCGCTCGACCAAATTCTCGTTAA 388077 Query 16602 CGATACCGTCACTTGCAGCAAAAAACGCCA 16631 | || ||||| ||||| || || |||| Sbjct 388078 CAATGCCGTCCGAGGCAGCGAAGAAGGCCA 388107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511332330774160