Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1635 571 8e-158 seq1592 156 6e-33 >seq1635 Length=10282868 Score = 571 bits (632), Expect = 8e-158 Identities = 1262/1875 (67%), Gaps = 18/1875 (1%) Strand=Plus/Minus Query 78708 CTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCC 78767 |||||| | || ||||| || | || || ||||| || |||| ||| |||||||| Sbjct 1117708 CTTGTCGACAGTAAATTGTATTGCGTTGGCGGCAGGTTTTGTGCGTAAATAATACATTCC 1117649 Query 78768 CGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGG 78827 |||||||| || |||| | | ||||| || || | ||| || | || Sbjct 1117648 GGTTTTTAGTCCAGCTTTCCAGGAGAAAAAATGTATGGATGTCAATTTTCCGTAGTTGGG 1117589 Query 78828 ATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 78887 ||||||| || | ||| | || ||||||||||| || || || || || || ||||| Sbjct 1117588 CTCTGCTACGTGAACATTAAATGACTGACTTTGATCAATAAATGCACCTCTATCAGCAGC 1117529 Query 78888 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 78946 |||||| || | | ||| || ||||||||| | ||||||||||| |||| || | Sbjct 1117528 CATTTTAATTGTGGATTTTACTGAAATTTCCCATACAGTTTTATAAAGATCGCG-AACCT 1117470 Query 78947 CTTCTGGAAG-GTTTGTAT-TCT-GAATGGATCCACCATCTGCCA-TAATCCTATTCTTG 79002 || |||| |||| || ||| ||||||| || || ||| | | || |||| || Sbjct 1117469 TTTGGGGAATAGTTTCAATATCTTGAATGGAGCC-CCTGCTGGAAATTATTTTATTTTTC 1117411 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 ||||| |||| |||||| | || |||||| | || | | ||| |||| || ||| Sbjct 1117410 ATCTCATCATCCCATAAGTCCAATTCTGTTAAATCCCTCAATAAATGATGATTGACCACT 1117351 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 |||||||| ||||| ||||||| | || |||||||| ||||||||||||| | ||| Sbjct 1117350 TGAAATTCACCAGATAATACTCGTCTCGTATAAATATTTGTGGTATATGGTTCGAATGAT 1117291 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 || ||||| |||| |||||| ||||| ||||| || ||||| || || || || || | Sbjct 1117290 TCGTTATTACCCATAATTTGTGCAGTAGATGCTGTAGGCATCGGCGCTACTAACAACGAA 1117231 Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242 || |||| |||| | | || | || || || || ||||||||| || | | Sbjct 1117230 TTCCTAATTCCGTGCTTTTTAATGTCTTCCTTCAGGCTTTGCCAATCCCATAGGTTCGTT 1117171 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGA--TCCTGTGT 79300 || || ||| | ||||||||||||||| || || || | | || |||| | Sbjct 1117170 GGAGTTTTATCCCACATATCATATTGTAGAATTCCCTTGCT--CACAGGACTTCCTTCAT 1117113 Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360 | |||||||| ||| | ||| || | ||||||||| || || | || || ||| Sbjct 1117112 AGGTTTCATATACTCCAAATTCTTCAGCAAGTTCACAACTAGCTTCCAGAGCCCCAAAAT 1117053 Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAAT 79420 |||| ||||| || || | | || | | |||||| ||| ||| | ||| || Sbjct 1117052 AAATTGTTTCAAATATTTGTTGGTTTAAAAGACCGGCTTCTTCGCTTTCATAGGGAAAAC 1116993 Query 79421 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 79480 | | ||| || ||||| ||||| ||||||||||| |||||||| || | ||| || Sbjct 1116992 GCATTAAAATTAAAGCGTCAGCTAAACCTTGAACACCTATACCGATTGGACGATGCCTTA 1116933 Query 79481 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 79540 ||| || | | |||||||| | || ||||| || || ||||||||||| || |||| Sbjct 1116932 AATTGGACTTCTTGGCTTCTGGCAAGGGGTAATAGTTGATGTCTATAATTTTGTTAAGAT 1116873 Query 79541 TCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA---TCGTCCATCTA 79597 | || | | |||| || || |||| ||| |||||| | | | | | Sbjct 1116872 TTTTGGCAACAGTTTTGGTTACTTCTTTTAATTTTTTGAAATCATACGTTTTTTCTGGTG 1116813 Query 79598 TTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657 |||| |||||||||| || | || || | ||| || || || ||||||| || | | Sbjct 1116812 TTACGAACATGTTCAGTGCTATGGAAGCTAAATTGCAGACAGCGACCTCATCAGGTGCTG 1116753 Query 79658 CATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGAT 79717 || | | ||||| || || | ||||| || |||||||| || | ||||||||||| Sbjct 1116752 AGTACTCGACAATTTCTGTACATAAATTACTGCATTTAATGGTGCCAACATTTTGTTGAT 1116693 Query 79718 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAG 79777 | |||||| | ||||| | ||||||| |||| ||| | || ||||||| || | || | Sbjct 1116692 TGCTCTTTCTATTACAGGAATCCTTAAAAAGCATGTATGGGTTACCAGTCTCCACTTGCG 1116633 Query 79778 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA-TTATAGACTTGTATCTCTTTTCT 79836 |||||||||| || ||| | | | || | | | | || | | | || |||| Sbjct 1116632 ATTCTATAATAGCAAACCATAAAGCCTGGGCTTCCACTGTTCGATTCGCACGTC-CTTCT 1116574 Query 79837 CTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA 79896 || |||| ||| | ||| || | || ||||||||||| | | |||||| Sbjct 1116573 TGCTCATATTTGACATAGAGCTCTTCAAATTTTTCGCCCCAAACATCTTGAAGGCCAGGA 1116514 Query 79897 CATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGA 79956 |||| | ||||||||||||||||| | ||| ||| || |||||||| || ||| Sbjct 1116513 CATTTATGTGGACACATCAACGACCAGCTTTCATTTGCCTCAACACGTTTCATGAAAAGA 1116454 Query 79957 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTC 80016 ||||||||||| ||||| ||| ||||| | | ||| | || || ||||| || || Sbjct 1116453 TCAGGAATCCATAGAGCGTAAAAAAGATCACGTGCTCTGTTTTCTTCTTTTCCAGTGTTT 1116394 Query 80017 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 80076 |||| || || | ||| | | || ||| |||||||| || || || || || || | Sbjct 1116393 CTTTTGAGGTCTAAAAACTCAAAAACATCTGAATGCCAGGGCTCTAAATAAATAGCAAAG 1116334 Query 80077 ACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 80136 | || |||| ||| ||||||||||| | |||| || |||||| ||||||| Sbjct 1116333 GCACCAGGTCTTTTTCCACCTCCCTGATCAACATATCGTGCCACATTATTAAAAACTCTT 1116274 Query 80137 AACATTGGAA-TAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGC 80195 | |||||||| |||| ||||| || ||||| || || || | || | | || | || Sbjct 1116273 AGCATTGGAACTAAT-CCATTCGACGTACCGTTCGTTCCACATATGGATGTGCCTTTAGC 1116215 Query 80196 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 80255 |||||| | || || || ||||| ||||| || || || | ||| ||| | Sbjct 1116214 ACGAATGCAATGAACATTAAGTCCAATTCCACCTGCTGACTTGGAAATCAGTGCACATTG 1116155 Query 80256 TTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCT 80315 || | | | | | || || || || ||| | |||| | | |||||||| Sbjct 1116154 TTCAACTGATTTAAAAATACCTTCAATTGAATCCGAATTCATTGTCAAAAGAAAACATGA 1116095 Query 80316 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 80375 |||| ||| | ||| | ||| | ||| ||| | || || || || |||||||| | Sbjct 1116094 GGACAATTGAGGTCGATTTGTTGCAGCAGCAAAAAGCGTTGGCGAGGCATGCGTAAAATA 1116035 Query 80376 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCC 80435 | |||||||||||| ||||| || || | || | || ||||| | |||||| || Sbjct 1116034 TCGTTCAGACAGTAGGTTGTAAGTTTCCACTGCCGCATCAATATCGTCTCCATGAATACC 1115975 Query 80436 TACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 80495 | ||||| ||||| | |||||| || || | ||| | || || |||||| || | Sbjct 1115974 AAGAGCGACGCGCATCAGCATGTGTTGTGGACGTTCTGCAATTTTCCCATTTATCTTAAG 1115915 Query 80496 CAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 80555 | || || || | || ||||| ||||||||||| || ||| ||||| || || Sbjct 1115914 TAGATAGGAACGCTCGAGCGTCTTAAATCCAAAATAGTTATAACCAAAATCTCGGTCATA 1115855 Query 80556 AATAATAACCGAGTT 80570 ||||||| | ||||| Sbjct 1115854 AATAATAGCGGAGTT 1115840 >seq1592 Length=614636 Score = 156 bits (172), Expect = 6e-33 Identities = 355/532 (67%), Gaps = 3/532 (1%) Strand=Plus/Plus Query 49963 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 50022 || || |||||||| ||||| ||||| | || || |||||||| || || || ||| Sbjct 387681 GCAAAGTCGCAGTGAAGACCTTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCG 387740 Query 50023 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATT 50082 ||||| || |||||||| || |||||||| || || ||||| ||| |||||||||| Sbjct 387741 GGCATGAGACCACGCTTCTTCAGCCAAAAGATCGAGGCAAAGCTGCCACTAAAGAAGATT 387800 Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG-CGCTGTCATG--TATC 50139 ||||| || || |||||||||| || | ||| || | ||| || | || | |||| Sbjct 387801 CCTTCCACGGCCGCAAAGGCAATAATACGCTCGGCAAAGTTGGCCGATTTCGAGGATATC 387860 Query 50140 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 50199 || ||||| || ||||| |||||| ||||| || || || ||||| || Sbjct 387861 CAGGACATGGCCCAGTCCGCCTTGCGCTTTACAGCCGGCATGGTCTCAATAGCATTGAAC 387920 Query 50200 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 50259 | |||| || | || | || || || || | | || ||||| || Sbjct 387921 AAGTAGTCGCGCTCCTGCGGCTCCCGTATGTAGGTGTCAATGAGCACGCTGTACATCTCG 387980 Query 50260 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 50319 || || | || || ||||| ||||| || |||||||| || | ||||| || |||||| Sbjct 387981 GAGTGCACATTCTCCATGGCTATCTGGAAGCCGTAGAAGCAACGTGCCTCTGTGATCTGC 388040 Query 50320 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 50379 || || || ||| || || | ||||| || || || || ||||| ||| || || Sbjct 388041 ACCTCCTGACTAAAGCGCTCGACCAAATTCTCGTTAACAATGCCGTCCGAGGCAGCGAAG 388100 Query 50380 AACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTG 50439 || |||| ||||| ||||| | |||||| || || ||| || | Sbjct 388101 AAGGCCAGCACATGGGAGATAAAGTAGCGCTCGTTGTCAGTGAGACGGGCCCAGTCCGTC 388160 Query 50440 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 || || |||| ||| || |||||||| ||||| || || || || |||| Sbjct 388161 GCGTCCTTCGATAGATCCACCTCTTCCACGGTCCAGAAGGAGGCTTCCGCCT 388212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718153535814320