Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1619 156 4e-33 seq1628 140 3e-28 seq1604 113 4e-20 seq1635 104 2e-17 seq3819 86.0 6e-12 >seq1619 Length=1930428 Score = 156 bits (172), Expect = 4e-33 Identities = 167/219 (76%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850 ||||| |||||||||||||| |||||||| || | ||| |||||| || ||| || | Sbjct 106942 CGCAATACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCG 106883 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||||||||| || ||| | ||||| || | ||||||||||| ||||| || || | Sbjct 106882 --TCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCT 106825 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || |||||||| ||| ||||| | | | ||||| || | |||| Sbjct 106824 TGTCCTGAATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGA 106765 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||| || ||||| || || ||||| ||||||||||||| Sbjct 106764 TGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGC 106726 Score = 156 bits (172), Expect = 4e-33 Identities = 167/219 (76%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850 ||||| |||||||||||||| |||||||| || | ||| |||||| || ||| || | Sbjct 108976 CGCAATACCAAGTGCAAAGTGGATTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCG 108917 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||||||||| || ||| | ||||| || | ||||||||||| ||||| || || | Sbjct 108916 --TCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCT 108859 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || |||||||| ||| ||||| | | | ||||| || | |||| Sbjct 108858 TGTCCTGAATCTTAGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGA 108799 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||| || ||||| || || ||||| ||||||||||||| Sbjct 108798 TGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGC 108760 Score = 141 bits (156), Expect = 8e-29 Identities = 171/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | ||| || | |||||| ||||| || || ||||| || | ||| |||||| Sbjct 108760 CCTCCGCGCAAGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGAT 108701 Query 94841 ATAGT--GTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||| || | ||||||||||| || ||| | ||||| || | ||||||||||| | Sbjct 108700 AAAGTACGTCCG--TCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGG 108643 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| || || ||||| | || || ||||||||| ||| ||||| | | | |||| Sbjct 108642 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAGGGCTCGA 108583 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || | |||||||| || ||||| ||||| || || ||||||||||||| Sbjct 108582 CCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATGC 108532 Score = 138 bits (152), Expect = 1e-27 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| |||||| || ||| || | ||| Sbjct 106478 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCG--TCC 106421 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 106420 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 106361 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || ||||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 106360 TGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTC 106301 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| ||||| || || ||||||||||||| Sbjct 106300 TTGCCAGTCAGAGTCTTGACGAAGATCTGCATGC 106267 Score = 138 bits (152), Expect = 1e-27 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || |||||||| | ||| |||||| || ||| || | ||| Sbjct 108515 CACCAAATGCAAGGTGGACTCCTTTTGGATGTTGTAATCGGACAAAGTACGTCCG--TCC 108458 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 108457 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 108398 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || ||||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 108397 TGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTC 108338 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| || || || || ||||||||||||| Sbjct 108337 TTGCCAGTCAGGGTCTTGACGAAGATCTGCATGC 108304 Score = 132 bits (146), Expect = 4e-26 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | ||| || | ||||||||| | || || ||||| || | ||| || ||| | Sbjct 108304 CCTCCGCGCAAACGGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 108245 Query 94841 ATAGT--GTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || || | ||||||||||| || ||| | ||||| || | ||||||||||| | Sbjct 108244 AACGTACGTCCG--TCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGG 108187 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| || || ||||| | || || ||||||||| ||| ||||| | | | |||| Sbjct 108186 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAGGGCTCGA 108127 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || | |||||||| || ||||| ||||| || || ||||||||||||| Sbjct 108126 CCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATGC 108076 Score = 131 bits (144), Expect = 2e-25 Identities = 173/234 (74%), Gaps = 7/234 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | ||| || | |||||| ||||| || || ||||| || | ||| |||||| Sbjct 106726 CCTCCGCGCAAGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGAT 106667 Query 94841 ATAGT--GTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||| || | ||||||||||| || ||| | ||||| || | ||||||||||| | Sbjct 106666 AAAGTACGTCCG--TCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGG 106609 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTG-ACGGCGC-CGACAGTGTCAGCGTGGTC 94956 |||| || || ||||| | || || |||||| ||| | ||| ||||| | | | || Sbjct 106608 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTGAACGATTCTCGATGGTGTCCGAGGGCTC 106549 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGT-AAGAGTTTTCACAAAGATCTGCATGC 95009 ||| || | |||||||| || ||||| |||||| || || ||||||||||||| Sbjct 106548 GACCTCGAGGGTGATGGTCTTGCCAGTCAAGAGTCTTGACGAAGATCTGCATGC 106495 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || |||||||| | ||| |||||| || || || | ||| Sbjct 108059 CACCAAATGCAAGGTGGACTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCG--TCC 108002 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || ||||| || ||| | ||||| || | ||||||||||| ||||| || || ||||| Sbjct 108001 TCTAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCC 107942 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || |||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 107941 TGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTC 107882 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| || || || || ||||||||||||| Sbjct 107881 TTGCCAGTCAGGGTCTTGACGAAGATCTGCATGC 107848 Score = 116 bits (128), Expect = 3e-21 Identities = 170/235 (72%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGC-T 94839 ||||| | || || | |||||| ||||| || || ||||| || | ||| |||||| | Sbjct 105569 CCTCCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGAT 105510 Query 94840 CATAGT--GTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 | ||| || | ||||||||||| || ||| | ||||| || | ||||||||||| Sbjct 105509 AAAAGTACGTCCG--TCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGG 105452 Query 94898 GGAATACCTTCTTTGTCAT--AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT 94955 ||||| || || ||||| | || || ||||||||| ||| ||||| | | | | Sbjct 105451 GGAATGCCCTCCTTGTCCTTGGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAGGGCT 105392 Query 94956 CG-ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || | | |||||||| || ||||| ||||| || || ||||||||||||| Sbjct 105391 CGAACAACGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATGC 105337 Score = 116 bits (128), Expect = 3e-21 Identities = 158/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || |||||||| | ||| || ||| || || || | ||| Sbjct 106250 CACCAAATGCAAGGTGGACTCCTTTTGGATGTTGTAGTCGGACAACGTACGTCCG--TCC 106193 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG-GAATACCTTCTTTGTC 94914 |||||||| || ||| | ||||| || | ||||||||||| | |||| || || ||||| Sbjct 106192 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGTGAATGCCCTCCTTGTC 106133 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | || || |||||||| ||| ||||| | | | ||||| || | |||||||| Sbjct 106132 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGT 106073 Query 94975 TTTTCCAGTAAGAGTTTTCA-CAAAGATCTGCATGC 95009 || ||||| ||||| || | | ||||||||||||| Sbjct 106072 CTTGCCAGTCAGAGTCTTGAGCGAAGATCTGCATGC 106037 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/219 (72%), Gaps = 9/219 (4%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT-CATA-GT--GTTGGAAT 94853 |||||| ||||| || || ||||| || | ||| |||||| || | || || | | Sbjct 106020 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAATCGGGACAAACGTACGTCCG--T 105963 Query 94854 CCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACC--TTCTTT 94911 |||| ||||| || ||| | ||||| || | ||||||||||| ||||| || | | || Sbjct 105962 CCTCTAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCGCTCCCTT 105903 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGT-CAATCGTGA 94970 ||| | || || |||||||| ||| ||||| | | | ||||| | | | |||| Sbjct 105902 GTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTTCGAGGGTGA 105843 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||| || ||||| || || || || ||||||||||||| Sbjct 105842 TGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATGC 105804 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/219 (72%), Gaps = 9/219 (4%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGA--TTCCTTTTGCACGTTATAATC-GCTCATAGT--GTTGGAA 94852 |||||| ||||| || || | |||| || | ||| ||||| | || ||| || | Sbjct 107594 CACCAAATGCAAGGTGGAACTCCCTTCTGGATGTTGTAATCAGGACAAAGTACGTCCG-- 107537 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT-TGCTGATCTGGAGGAATA-CCTTCTT 94910 ||||| ||||| || ||| | ||||| || | ||||||||||| ||||| || || | Sbjct 107536 TCCTCTAGCTGCTTGCCGGCGAAGATCAAACGCCTGCTGATCTGGGGGAATGGCCCTCCT 107477 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | || || |||||||| ||| ||||| | | | ||||| || | |||| Sbjct 107476 TGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGA 107417 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 |||| || ||||| || || || || ||||||||||||| Sbjct 107416 TGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATGC 107378 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/221 (71%), Gaps = 11/221 (5%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 ||||||||| | || || ||||| || | ||| || ||| || || || | ||| Sbjct 105787 CACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTACGTCCG--TCC 105730 Query 94856 TCCAGCTGTTTTCCGC-CA-AAGATTAATCTTTGCTGATCTGGAGGAAT-ACCTTCTTTG 94912 |||||||| || ||| || ||||| || | ||||||||||| ||||| ||| ||| | Sbjct 105729 TCCAGCTGCTTGCCGGACAGAAGATCAAACGCTGCTGATCTGGGGGAATGCCCTCCTTCG 105670 Query 94913 TCATAAATTTTTG--CCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 || | | ||| |||||||| ||| ||||| | | | ||||| || | |||| Sbjct 105669 TCCTGGGATCTTGGCCCTTGACGTTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGA 105610 Query 94971 TGGT-TTTTCCAGT-AAGAGTTTTCACAAAGATCTGCATGC 95009 |||| ||| ||||| | | || ||||| ||||||||||||| Sbjct 105609 TGGTCTTTGCCAGTCAGGGGTCTTCACGAAGATCTGCATGC 105569 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/221 (71%), Gaps = 10/221 (5%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCC 94855 |||||| ||||| || || ||||| || | ||| || ||| || || || | ||| Sbjct 107831 CACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAGTCGGACAACGTACGTCCGG-TCC 107773 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACC-TTCTTTGT- 94913 |||||||| || ||| | ||||| || | ||||||||||| ||||| || || |||| Sbjct 107772 TCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCGCTCCTTGTC 107713 Query 94914 CATAAATTTTTGCCTTGACGGCGCCGACAGTGT-CAGCGTGGTCGACGT--CAATCGTGA 94970 | | || || |||||||| ||| |||| | | | | ||||| | || |||| Sbjct 107712 CTTGGATCTTGGCCTTGACATTCTCGATGGTGTCCCGAGGGCTCGACCTTCGAAGGGTGA 107653 Query 94971 TGGTTTTTCCAGT-AAGAGTTTTCACAAAGATC-TGCATGC 95009 |||| || ||||| | |||| ||||| |||||| ||||||| Sbjct 107652 TGGTCTTGCCAGTCAGGAGTCTTCACGAAGATCTTGCATGC 107612 >seq1628 Length=3966273 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || ||||| || | ||| || ||| || |||| | |||||| Sbjct 3671158 CACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTC 3671217 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || ||| | ||||| | | ||||||||||| ||||| || || ||||| | Sbjct 3671218 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 3671277 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || |||||||| ||| ||||||| | | ||||| || | |||||||| || Sbjct 3671278 GATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTT 3671337 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||||||||| ||||| ||||| Sbjct 3671338 GCCAGTGAGAGTTTTCACGAAGATTTGCAT 3671367 >seq1604 Length=992631 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| |||| ||| || ||||| || | ||| || || | |||| | | Sbjct 939691 CGCAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 939632 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 |||||||| || || ||| | ||||| | | ||||| ||||| || || || || ||| Sbjct 939631 TCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTG 939572 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||| | | || || || | |||||| Sbjct 939571 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATG 939512 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| | |||||||||||||||||||| Sbjct 939511 GTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 939477 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| |||| ||| || ||||| || | ||| || || | |||| | | Sbjct 940375 CGCAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 940316 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | ||||| | | ||||| ||||| || || || || ||| Sbjct 940315 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTG 940256 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||| | | || || || | |||||| Sbjct 940255 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATG 940196 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || | |||||||||||||| ||||| Sbjct 940195 GTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 940161 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| |||| ||| || ||||| || | ||| || || | |||| | | Sbjct 940147 CGCAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 940088 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| | || || | | ||||| || || || || || || ||| Sbjct 940087 TCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTG 940028 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | | ||||| | | || || || | |||||| Sbjct 940027 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATG 939968 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || | |||||||||||||| ||||| Sbjct 939967 GTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 939933 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||| |||| ||| || ||||| || | ||| || || | |||| | |||||| Sbjct 939914 CACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 939855 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || ||| | ||||| | | ||||| || || || || || || ||||| | Sbjct 939854 CAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTG 939795 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | | ||||| | | || || || | ||||||||||| Sbjct 939794 GATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACCTCCAGGGTGATGGTTTT 939735 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || | ||||||||||| || ||||| Sbjct 939734 TCCGGTCAAGGTTTTCACAAAAATTTGCAT 939705 >seq1635 Length=10282868 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || || ||||| || || ||||| || | ||||||||| || ||||| | ||| | Sbjct 1470216 ACTAAATGCAAGGTTGACTCCTTCTGAATGTTATAATCAGACA--GTGTTCGGCCATCTT 1470273 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| || || || | ||||| || | || |||||||||||||| ||||||||||| | Sbjct 1470274 CCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCT 1470333 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || || ||||| ||| || || | | ||||| |||| || ||||| | Sbjct 1470334 GGATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTTATGGTCT 1470393 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 | || || || || || ||||||||||||||| || Sbjct 1470394 TGCCCGTTAGGGTCTTTACAAAGATCTGCATGGTT 1470428 >seq3819 Length=1025 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||| || | ||| || ||||| || | ||| || || | |||| | | Sbjct 416 CGCAGCACCAAATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA 357 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||||||| || || | ||||| | | ||||| ||||| || || || || ||| Sbjct 356 TCTTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTG 297 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || || || ||| | | ||||||| | || || || | || || Sbjct 296 TCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCAGAAGGTTCCACCTCCAGGGTAATA 237 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| ||||| ||||| || || ||||| Sbjct 236 GTTTTTCCAGTCAGAGTCTTCACGAAAATTTGCAT 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448219260469680