Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1611 93.3 1e-15 >seq1611 Length=1448063 Score = 93.3 bits (102), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 3343 CGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGG-CTCCCT 3401 || |||||||||| |||| |||||| || |||||||||||||| || || | | Sbjct 115942 CGGGTCTTTCCAAAGGTCACGAAATGTACGTTCCACAAATACGGTCCCTCCGGACGATGT 116001 Query 3402 GGAAAACT-ACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACA 3460 | | || | |||| ||||| ||| | || ||| ||| | |||||||| ||||||||| Sbjct 116002 GCAGAAGTTACGACGGACTGTGCGTGCTGCCGTTAAACATTGTCAACGAAAAGATCTACG 116061 Query 3461 TTTTCCTCTGGTTCTGGTTC 3480 | ||||| |||||||||||| Sbjct 116062 TGTTCCTGTGGTTCTGGTTC 116081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478247613000