Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1635 134 3e-26 seq1619 125 2e-23 seq3819 113 1e-19 seq1604 113 1e-19 seq1628 96.9 8e-15 >seq1635 Length=10282868 Score = 134 bits (148), Expect = 3e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | |||||| | ||| | || || || || || ||||| || | Sbjct 1470197 TCCACCACGAAGCCGAAGTACTAAATGCAAGGTTGACTCCTTCTGAATGTTATAATCAGA 1470256 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| ||||| || || |||||||||| |||||||||| ||||| Sbjct 1470257 CAGTGTTCGGCCATCTTCCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGA---TCTGG 1470313 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||||||||| |||||||| || ||||| || ||||| || | ||| || ||| Sbjct 1470314 AGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTC 1470373 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || || || ||||| || || |||||||| Sbjct 1470374 GACCTCAAGAGTTATGGTCTTGCCCGTTAGGGTCTTTACAAAGATCTGCAT 1470424 >seq1619 Length=1930428 Score = 125 bits (138), Expect = 2e-23 Identities = 172/237 (73%), Gaps = 9/237 (4%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || || | ||| | ||| || |||||||| || |||| Sbjct 106271 CATG-CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTTTGGATGTTGTAGT 106213 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | ||| |||||||| || | || || || |||||||||| |||||| ||| | Sbjct 106212 CGGACAACGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGA---T 106156 Query 288362 CTGGG----ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTC 288417 ||||| || || || || |||||||| || || || || || || || | || Sbjct 106155 CTGGGGTGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAG 106096 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA-CGAATATCTGCAT 288473 | || || ||||| ||||| ||||| || ||||||||||||| |||| |||||||| Sbjct 106095 GGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAGCGAAGATCTGCAT 106039 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| | ||| |||||||| || | || || || |||||| Sbjct 108268 TCCTTCTGGATGTTGTAGTCGGACAACGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 108209 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| ||| |||||| || || || || |||||||| || || || ||| Sbjct 108208 ATCAAACGCTGCTGA---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACG 108152 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || || ||||| ||||| ||||| || |||||||||||| Sbjct 108151 TTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTG 108092 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 108091 ACGAAGATCTGCAT 108078 Score = 123 bits (136), Expect = 6e-23 Identities = 170/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || || | ||| | ||| || || ||||| || || | Sbjct 106499 CATG-CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAAT 106441 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | || |||||||| || | || || || |||||||||| |||||| ||| | Sbjct 106440 CGGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGA---T 106384 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| || || || || |||||||| || || || ||||| || || | || | Sbjct 106383 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAGG 106324 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || ||||||||||||||||| |||||||| Sbjct 106323 GCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 106269 Score = 123 bits (136), Expect = 6e-23 Identities = 170/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || || | ||| | ||| || |||||||| || || | Sbjct 108080 CATG-CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTTTGGATGTTGTAAT 108022 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | || |||||||| |||| || || || |||||||||| |||||| ||| | Sbjct 108021 CGGACAAGGTACGTCCGTCCTCTAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGA---T 107965 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| || || || || |||||||| || || || || || || || | || | Sbjct 107964 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAGG 107905 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 107904 GCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 107850 Score = 123 bits (136), Expect = 6e-23 Identities = 170/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || || | ||| | ||| || |||||||| || || | Sbjct 108536 CATG-CCACCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTTTGGATGTTGTAAT 108478 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | || |||||||| || | || || || |||||||||| |||||| ||| | Sbjct 108477 CGGACAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGA---T 108421 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| || || || || |||||||| || || || ||||| || || | || | Sbjct 108420 CTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCCGAGG 108361 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 108360 GCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 108306 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| | || |||||||| || | || || || |||||| Sbjct 108724 TCCTTCTGGATGTTGTAATCGGATAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 108665 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| ||| |||||| || || || || |||||||| || || || ||| Sbjct 108664 ATCAAACGCTGCTGA---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACG 108608 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || || ||||| ||||| ||||| || |||||||||||| Sbjct 108607 TTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTG 108548 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 108547 ACGAAGATCTGCAT 108534 Score = 111 bits (122), Expect = 4e-19 Identities = 174/244 (71%), Gaps = 20/244 (8%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || || | ||| | ||| || || ||||| || || | Sbjct 106041 CATG-CCACCGCGCAGACGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAAT 105983 Query 288302 CGG--CGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA 288359 ||| | | ||| |||||||| |||| || || || |||||||||| |||||| ||| Sbjct 105982 CGGGACAAACGTACGTCCGTCCTCTAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGA-- 105925 Query 288360 ATCTGGG---ATTCC--TTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC- 288413 |||||| || || | | || |||||||| || || || || || || || | || Sbjct 105924 -TCTGGGGGAATGCCGCTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCC 105866 Query 288414 ----GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469 |||||| ||||||| ||||| ||||| || ||||| ||||||||||| |||| Sbjct 105865 GAGGGCTCGAC----CTTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCT 105810 Query 288470 GCAT 288473 |||| Sbjct 105809 GCAT 105806 Score = 100 bits (110), Expect = 7e-16 Identities = 171/243 (70%), Gaps = 19/243 (8%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | || || | ||| | ||| || || ||||| || || | Sbjct 105573 CATG-CCTCCGCGCAGGCGGAGCACCAAATGCAAGGTGGACTCCTTCTGGATGTTGTAAT 105515 Query 288302 CGGCGAGC-GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAA 288360 ||| | || |||||||| || | || || || |||||||||| |||||| ||| Sbjct 105514 CGGATAAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGA--- 105458 Query 288361 TCTGGG---ATTCCTTCTTTATCCT--GGATTTTCGCTTTCACGTTTTCTATAGAATC-- 288413 |||||| || || || || |||| |||| || || || ||||| || || | || Sbjct 105457 TCTGGGGGAATGCCCTCCTTGTCCTTGGGATCTTAGCCTTGACGTTCTCGATGGTGTCCG 105398 Query 288414 ---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 |||||| || |||| ||||| ||||| || ||||||||||||||||| ||||| Sbjct 105397 AGGGCTCGA----ACAACGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTG 105342 Query 288471 CAT 288473 ||| Sbjct 105341 CAT 105339 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/197 (73%), Gaps = 9/197 (5%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| | || |||||||| || | || || || |||||| Sbjct 106690 TCCTTCTGGATGTTGTAATCGGATAAAGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 106631 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCA-C 288398 |||| |||||| ||| |||||| || || || || |||||||| || || || | | Sbjct 106630 ATCAAACGCTGCTGA---TCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGAAC 106574 Query 288399 GTTT-TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA-GAGTC 288456 | || || || | || | || || ||||| ||||| ||||| || |||| ||||| Sbjct 106573 GATTCTCGATGGTGTCCGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAAGAGTC 106514 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 106513 TTGACGAAGATCTGCAT 106497 Score = 96.9 bits (106), Expect = 8e-15 Identities = 169/240 (70%), Gaps = 11/240 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCT--TTCTTTTTGGATATTATA 288299 |||| |||||||| || | || || | ||| | ||| | | || ||||| || || Sbjct 107616 CATGCCCACCGCGCAGACGGAGCACCAAATGCAAGGTGGAACTCCCTTCTGGATGTTGTA 107557 Query 288300 GTC-GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC-TGTTGA 288357 || || | || |||||||| |||| || || || |||||||||| |||| || ||| Sbjct 107556 ATCAGGACAAAGTACGTCCGTCCTCTAGCTGCTTGCCGGCGAAGATCAAACGCCTGCTGA 107497 Query 288358 GAATCTGGG---ATT-CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC 288413 |||||| || || || || |||||||| || || || || || || || | || Sbjct 107496 ---TCTGGGGGAATGGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC 107440 Query 288414 GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 107439 CGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 107380 >seq3819 Length=1025 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||| || ||||| | || || || |||||| Sbjct 392 TCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 333 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || |||||||| || |||||| ||||| || || |||||||| || ||||||||| Sbjct 332 ATGAGACGCTGCTGG---TCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCTTTCACG 276 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | ||| || || || || || || || || ||||||||||| Sbjct 275 TTCTCAATGGTGTCAGAAGGTTCCACCTCCAGGGTAATAGTTTTTCCAGTCAGAGTCTTC 216 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 215 ACGAAAATTTGCAT 202 >seq1604 Length=992631 Score = 113 bits (124), Expect = 1e-19 Identities = 172/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | ||| | || || || ||||| || ||||| | Sbjct 939703 CCACCGCGGAGACGCAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 939644 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || || || | ||| || || |||||||| |||||||| || ||| Sbjct 939643 AGAGTGCGGCCATCCTCCAGTTGCTTGCCGGCGAAGATGAGACGCTGCTG---GTCTGGG 939587 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| || || |||||||| || || |||||||| || || | ||| | || Sbjct 939586 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCC 939527 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG--TTAT 288481 || || || ||||| || || || |||| || || || || ||||||||| || |||| Sbjct 939526 ACCTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTCACAAAGATCTGCATTTTGTATTAT 939467 Query 288482 TCT 288484 ||| Sbjct 939466 TCT 939464 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || | ||| | || || || ||||| || ||||| | Sbjct 939931 CCACCGCGGAGACGAAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 939872 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || |||||||| |||||||| || | ||| Sbjct 939871 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 939812 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || |||||||| || || |||||||| || || | ||| | || || Sbjct 939811 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 939752 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||||| || || || || || ||||| Sbjct 939751 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAAATTTGCAT 939705 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | ||| | || || || ||||| || ||||| | Sbjct 940159 CCACCGCGGAGACGCAGCACCAAATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 940100 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||| || |||||||| || | ||| Sbjct 940099 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGG 940040 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || |||||||| || || |||||||| || || | ||| | || || Sbjct 940039 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGGATGGCTCCACC 939980 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || ||||||| || || || || || ||||| Sbjct 939979 TCCAGGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATTTGCAT 939933 >seq1628 Length=3966273 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || || || | || || || |||||| Sbjct 3671177 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 3671236 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || ||||||| || || || || |||||||| || || || || Sbjct 3671237 ATCAGACGCTGCTG---ATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACA 3671293 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || || || | ||||| ||||| || || ||||| || Sbjct 3671294 TTCTCGATGGTGTCAGAGGGCTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGAGTTTTC 3671353 Query 288460 ACGAATATCTGCATT 288474 ||||| || |||||| Sbjct 3671354 ACGAAGATTTGCATT 3671368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179460362334164