Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1592 109 7e-19 seq1620 95.1 2e-14 >seq1592 Length=614636 Score = 109 bits (120), Expect = 7e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 |||||| ||||| | | || |||||| || || || |||||||| ||| ||| Sbjct 387839 CTTTGCCGAGCGTATTATTGCCTTTGCGGCCGTGGAAGGAATCTTCTTTAGTGGCAGCTT 387780 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 | | || | |||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct 387779 TGCCTCGATCTTTTGGCTGAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGA 387720 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG 102335 ||| ||||| |||||||| || || ||| || ||||||||| Sbjct 387719 GCTGATCTCCCGTGACGAAGGTCTTCACTGCGACTTTGCGGTG 387677 >seq1620 Length=1990440 Score = 95.1 bits (104), Expect = 2e-14 Identities = 178/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 176021 TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTG 176080 ||||| || ||| | || || ||||| |||||||| | |||||| || | || || ||| Sbjct 857283 TCCTTTCCGCCCGTCAGCCGAGTACCGAACTGACCGCGCGGCTCCAGCAAGTTTATGTTG 857342 Query 176081 TTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCG 176140 || ||||| | ||||| | |||| || || || || | ||| ||||| || ||| Sbjct 857343 TTCGAACCAACGTAGTTCTGGGCCAGATTCACGATAGTCATCTGGAGGGAGACCTCGCCG 857402 Query 176141 TGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCC 176200 |||||||| || | |||| || || | | | || ||| ||||| || | ||| | Sbjct 857403 TGGTGGTAGGCCGACATCTCCGCCACGGAGCCAGACAGCTGGGCCACCTTTACCTCGCGC 857462 Query 176201 TTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCC 176260 ||| || | ||| || | | |||| |||||||| || ||||| || |||||| Sbjct 857463 TTGTCGTTGCGCTTGAAGCAAGTGAACATGACCTTGCGCTGGCCCGGCTTCAGGCCATCC 857522 Query 176261 GCCATGTGTGCGATAGAACGCT 176282 ||| | | ||| || |||| Sbjct 857523 ACCAGGCTGGGGATGGAGCGCT 857544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620642786363360