Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq10857 188 3e-43 seq11201 100 1e-16 seq7445 96.9 1e-15 seq10664 84.2 8e-12 >seq10857 Length=2535 Score = 188 bits (208), Expect = 3e-43 Identities = 168/204 (82%), Gaps = 5/204 (2%) Strand=Plus/Minus Query 22272 GAAAACGGGGGCGAAGAAGT-TGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAAC 22330 ||||||| ||| |||||| ||||||| |||||||||| ||||| | |||| ||| || Sbjct 203 GAAAACGCTGGC-AAGAAGCATGTCCATGTTGGCCACGTCTAAATGCAGACTGCTGAGAC 145 Query 22331 TCACCCAGGGATTGGCTGAGACGAAA-AACATATTCTCAATAAA-CCCTTTAGGGAAATA 22388 ||||| |||||||| ||||||| | |||||| ||||||| || |||||||||||| || Sbjct 144 GCACCCCGGGATTGGGAGAGACGAGACAACATACTCTCAATCAATCCCTTTAGGGAAGTA 85 Query 22389 GGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCC-GGA 22447 ||||||| ||||| |||||| ||||||| ||||||| || ||||||||||||| || Sbjct 84 GGCCAGGCACTCACCCAAACACGTCACATCTAGCGAATAAATATGTAGAAACTGCCAGGG 25 Query 22448 AATCGTCGTGGTATTCACTCCAGA 22471 | || |||||||||||||||||| Sbjct 24 CAGCGGCGTGGTATTCACTCCAGA 1 >seq11201 Length=2754 Score = 100 bits (110), Expect = 1e-16 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 22383 GAAATAGGCC-AGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACT 22441 |||||||| | | || ||||| | || ||| ||||||||| || |||||||||||||| Sbjct 2625 GAAATAGGGCTATGTACTCACCCTGACCCGCTACATCTTGCTTATGTATGTGTAGAAACT 2684 Query 22442 GCCGGAAA-TCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGG 22500 |||||||| |||| |||||| || ||||||||| | ||||| || | |||| ||||| Sbjct 2685 GCCGGAAATTCGTTGTGGTACTCCCTCCAGAGCAAAATAAACGATTTACGTTGCGCATGG 2744 Query 22501 AAAA 22504 ||| Sbjct 2745 CAAA 2748 >seq7445 Length=1560 Score = 96.9 bits (106), Expect = 1e-15 Identities = 123/156 (79%), Gaps = 10/156 (6%) Strand=Plus/Minus Query 22306 ACGTTTAAATCA-AAACTGG-TGAA-ACTC-ACCCAGG-GATTGGCT-GAGACGAAAAAC 22359 || ||||||| | ||||||| |||| |||| || |||| || || | |||||||||||| Sbjct 158 ACTTTTAAATGATAAACTGGGTGAATACTCTACTCAGGAGACTGAATTGAGACGAAAAAC 99 Query 22360 ATATTCTCAATAAACCCTTTAGGGAAAT-AGGCCAGGTTTTCACCGTAACACG-CCACAT 22417 | || | || | |||||||| | | || |||| ||||||||||||| ||||| || ||| Sbjct 98 AAATACCCACTCTACCCTTTAAGTACATGAGGCTAGGTTTTCACCGTCACACGCCCCCAT 39 Query 22418 CTTGCGAATATAT-GTGT-AGAAACTGCCGGAAATC 22451 ||||||| || | |||| || ||||||||||||| Sbjct 38 CTTGCGAGTAGGTAGTGTCCGAGACTGCCGGAAATC 3 >seq10664 Length=2434 Score = 84.2 bits (92), Expect = 8e-12 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 22488 AGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACC 22547 ||||||| | |||| ||||| ||||||| || ||||||| |||| |||| |||||||||| Sbjct 81 AGTTTGCACTTGGATAACGGAGTAACAAAGGGGAACACTGTCCCCTATCGCCAGCTCACC 22 Query 22548 GTCTTTCATTGCCATACGGAA 22568 | |||| || ||||||||| Sbjct 21 GGATTTCCCTGACATACGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184416681159684