Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20persimilis_20[refseq_20GCF_5F000005195.2_202006-04-18] 12,838 sequences; 188,374,079 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1592 154 2e-32 >seq1592 Length=614636 Score = 154 bits (170), Expect = 2e-32 Identities = 296/434 (68%), Gaps = 2/434 (0%) Strand=Plus/Plus Query 129742 CTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTT 129801 |||||| |||||||||||||| ||||||| ||| ||||||| |||| || || || Sbjct 387407 CTTCTCAAAGAAGTTTGTCTTTCCGTCCAGCGAGATCATCTCCATGAAATTGAAAGGATT 387466 Query 129802 CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGACGTACTC 129861 ||| | ||| | || ||| || | || || || ||||| | ||| |||| Sbjct 387467 CTTAGTGTTGTAGATCTTACCCACACCGAGCTCCCCTAGCAGCCGATCGGCCACGAACTC 387526 Query 129862 AATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAA 129921 ||||||| ||||| | ||||||| || || | || || || || || Sbjct 387527 GATGTACTGGGACATGAGAACACAGTTCATGCCAATCAAATTGACGGGCAGGGCTTCAGT 387586 Query 129922 GATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCTCCGTGCC 129981 || |||| ||| ||| || |||||||| |||| | ||| || ||| |||| || Sbjct 387587 GAGGAACTCCTGCTCGATTTCCACAGCATCCCTGATGATCTCGATGATGCGCTCCC-GCT 387645 Query 129982 AGGTCTATTGCGCAAAGTCTTGA-AGAGTTCCACGGCAAACTCCTGGTGGAGACCCTCGT 130040 || | ||| | | | ||| | | ||| ||||| || ||| ||||| |||| Sbjct 387646 TGGGCCGCTGCACTAGATGGTGATACATGAGCACCGCAAAGTCGCAGTGAAGACCTTCGT 387705 Query 130041 CACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACC 130100 |||||||||| || || || |||||| |||||| ||||||||||| |||||||||| || Sbjct 387706 CACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTCAGCC 387765 Query 130101 AGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGA 130160 | || |||| ||| |||| |||||||| || ||||| ||| || |||| | Sbjct 387766 AAAAGATCGAGGCAAAGCTGCCACTAAAGAAGATTCCTTCCACGGCCGCAAAGGCAATAA 387825 Query 130161 GACGCTCAGCAAAG 130174 |||||| |||||| Sbjct 387826 TACGCTCGGCAAAG 387839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618335956611280